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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • cytosol 2
  • mitochondrion 5
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400072615 Potato mitochondrion 97.66 97.66
VIT_08s0007g03120.t01 Wine grape mitochondrion 64.06 65.6
Solyc09g009980.1.1 Tomato mitochondrion 72.66 62.84
KRH67943 Soybean cytosol 57.03 58.87
KRG96201 Soybean cytosol, mitochondrion 57.03 57.48
KRH32771 Soybean mitochondrion 57.03 57.03
KRH72276 Soybean mitochondrion 56.25 56.25
CDY43741 Canola cytosol, mitochondrion 50.78 52.85
Bra017254.1-P Field mustard cytosol, mitochondrion 50.78 52.85
CDX79664 Canola mitochondrion 50.0 50.39
CDX84572 Canola cytosol, mitochondrion 50.0 50.39
Bra023055.1-P Field mustard cytosol, mitochondrion 50.0 50.39
AT2G36210.1 Thale cress mitochondrion 52.34 49.63
CDY43742 Canola mitochondrion 46.09 47.97
Bra017255.1-P Field mustard mitochondrion 46.09 47.97
Bra005293.1-P Field mustard mitochondrion 47.66 46.92
CDX75063 Canola mitochondrion 47.66 46.92
CDX84150 Canola mitochondrion 47.66 46.92
Solyc07g014620.1.1 Tomato mitochondrion 30.47 26.0
Solyc12g009280.1.1 Tomato nucleus 32.81 23.46
Solyc05g046320.1.1 Tomato plastid 30.47 22.67
Solyc05g025920.2.1 Tomato nucleus 33.59 21.72
Solyc07g042470.2.1 Tomato cytosol 32.81 20.69
Solyc03g124020.1.1 Tomato nucleus 25.78 17.55
Protein Annotations
EnsemblPlants:Solyc10g083320.1.1EnsemblPlantsGene:Solyc10g083320.1GO:GO:0008150GO:GO:0009719GO:GO:0009733InterPro:SAUR_fam
PANTHER:PTHR31374PANTHER:PTHR31374:SF28PFAM:PF02519UniParc:UPI0002769DA8UniProt:K4D3B9MapMan:35.2
Description
No Description!
Coordinates
chr10:-:63154991..63155377
Molecular Weight (calculated)
14475.4 Da
IEP (calculated)
4.911
GRAVY (calculated)
-0.098
Length
128 amino acids
Sequence
(BLAST)
001: MLGMNKFISM KKLAKKAKAI TSPTHEYFLI KDNKSNEEWS LANPNSTIPI GNLAIYVGEE RERFIVPTSY LSHPLFTILL EKTYNEFGFD QTNGLVVPCS
101: VNAFQEVVNA VECCNGKFDF GELVEEFL
Best Arabidopsis Sequence Match ( AT2G36210.1 )
(BLAST)
001: MLGKRIASFK NLAKKMKSIN TTTRSGGEGG SESTYNESLL MNEADEAAMM ASKTPTGTFA VYVGEERVKR VVPTSYLNHP LFRMLLDKSH DEFLCFEQKV
101: MLVVPCSLSV FQDVVNAVES CNGNFDFGEF VEEFL
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q8L8B9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.