Factsheet for Bra023055.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84572	Canola	cytosol, mitochondrion	100.0	100.0
Bra005293.1-P	Field mustard	mitochondrion	85.83	83.85
AT2G36210.1	Thale cress	mitochondrion	88.98	83.7
Bra017254.1-P	Field mustard	cytosol, mitochondrion	74.02	76.42
Bra017255.1-P	Field mustard	mitochondrion	73.23	75.61
VIT_08s0007g03120.t01	Wine grape	mitochondrion	55.91	56.8
KRH67943	Soybean	cytosol	51.18	52.42
KRH72276	Soybean	mitochondrion	51.97	51.56
KRH32771	Soybean	mitochondrion	51.18	50.78
KRG96201	Soybean	cytosol, mitochondrion	50.39	50.39
Solyc10g083320.1.1	Tomato	mitochondrion	50.39	50.0
PGSC0003DMT400072615	Potato	mitochondrion	50.39	50.0
PGSC0003DMT400023116	Potato	nucleus	53.54	46.9
Solyc09g009980.1.1	Tomato	mitochondrion	54.33	46.62
Bra035803.1-P	Field mustard	cytosol	28.35	30.77
Bra034954.1-P	Field mustard	cytosol	30.71	24.53
Bra002330.1-P	Field mustard	cytosol	29.92	22.89
Bra020127.1-P	Field mustard	cytosol	29.13	22.42
Bra006576.1-P	Field mustard	cytosol	29.13	17.21
Bra032097.1-P	Field mustard	cytosol, mitochondrion, nucleus	22.83	16.38
Bra024013.1-P	Field mustard	nucleus	23.62	15.79
Bra011258.1-P	Field mustard	nucleus	22.83	15.43

Protein Annotations

EnsemblPlants:Bra023055.1	EnsemblPlants:Bra023055.1-P	EnsemblPlantsGene:Bra023055	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF28	PFAM:PF02519	SEG:seg	UniParc:UPI000253FF09
UniProt:M4E2Q4	MapMan:35.2	:	:	:	:

Description

AT2G36210 (E=9e-056) | auxin-responsive family protein

Coordinates

chrA03:-:8434311..8434694

Molecular Weight (calculated)

14290.2 Da

IEP (calculated)

6.098

GRAVY (calculated)

-0.163

Length

127 amino acids

Sequence
(BLAST)

001: MMGKRIASFK NLAKKMKSIN TREGGSESTH NESLLINEAD VAATKTPTGT FAVYVGEERV RRVVPTSYLN HPLFRMLLDK SHDEFHCLDQ KVMLVVPCSL
101: SVFQDVINAI ESCNGNFEFG DFVEEFL

Best Arabidopsis Sequence Match ( AT2G36210.1 )
(BLAST)

001: MLGKRIASFK NLAKKMKSIN TTTRSGGEGG SESTYNESLL MNEADEAAMM ASKTPTGTFA VYVGEERVKR VVPTSYLNHP LFRMLLDKSH DEFLCFEQKV
101: MLVVPCSLSV FQDVVNAVES CNGNFDFGEF VEEFL

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q8L8B9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.