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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 2
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g009980.1.1 Tomato mitochondrion 97.24 95.27
PGSC0003DMT400072615 Potato mitochondrion 64.83 73.44
VIT_08s0007g03120.t01 Wine grape mitochondrion 59.31 68.8
KRH32771 Soybean mitochondrion 52.41 59.38
KRG96201 Soybean cytosol, mitochondrion 51.72 59.06
KRH67943 Soybean cytosol 50.34 58.87
KRH72276 Soybean mitochondrion 51.03 57.81
Bra017254.1-P Field mustard cytosol, mitochondrion 46.9 55.28
CDY43741 Canola cytosol, mitochondrion 46.9 55.28
Bra023055.1-P Field mustard cytosol, mitochondrion 46.9 53.54
CDX79664 Canola mitochondrion 46.9 53.54
CDX84572 Canola cytosol, mitochondrion 46.9 53.54
AT2G36210.1 Thale cress mitochondrion 48.97 52.59
Bra005293.1-P Field mustard mitochondrion 45.52 50.77
CDX84150 Canola mitochondrion 45.52 50.77
CDX75063 Canola mitochondrion 45.52 50.77
CDY43742 Canola mitochondrion 42.76 50.41
Bra017255.1-P Field mustard mitochondrion 42.76 50.41
PGSC0003DMT400035602 Potato mitochondrion, plastid 28.28 24.7
PGSC0003DMT400007582 Potato nucleus 29.66 24.02
PGSC0003DMT400035330 Potato cytosol 27.59 23.26
PGSC0003DMT400053349 Potato mitochondrion, plastid 26.21 23.03
PGSC0003DMT400007836 Potato nucleus 30.34 20.66
PGSC0003DMT400023703 Potato nucleus 22.07 18.29
Protein Annotations
EnsemblPlants:PGSC0003DMT400023116EnsemblPlantsGene:PGSC0003DMG400008950EntrezGene:107059497GO:GO:0008150GO:GO:0009719GO:GO:0009733
InterPro:SAUR_famPANTHER:PTHR31374PANTHER:PTHR31374:SF28PFAM:PF02519PGSC:PGSC0003DMG400008950RefSeq:XP_015161547.1
SEG:segUniParc:UPI0002964C23UniProt:M1AHT4MapMan:35.2::
Description
Calmodulin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008950]
Coordinates
chr9:-:2559406..2560266
Molecular Weight (calculated)
16309.3 Da
IEP (calculated)
6.234
GRAVY (calculated)
-0.449
Length
145 amino acids
Sequence
(BLAST)
001: MLGKKFGSMK KLAKKAKVIR SPSDNSIHHD QSQHLEYLLV KDDHDHDDQD QEYQGVSPTS AKSSKKMGTF AVYVGEERER FAVPTSYLSH PLFKILLEKT
101: YNEFGFEQTN GLVVPCSVAA FQEVVNAVEC CNGKFDFGGL VEEFL
Best Arabidopsis Sequence Match ( AT2G36210.1 )
(BLAST)
001: MLGKRIASFK NLAKKMKSIN TTTRSGGEGG SESTYNESLL MNEADEAAMM ASKTPTGTFA VYVGEERVKR VVPTSYLNHP LFRMLLDKSH DEFLCFEQKV
101: MLVVPCSLSV FQDVVNAVES CNGNFDFGEF VEEFL
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q8L8B9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.