Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 3
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc09g009980.1.1 | Tomato | mitochondrion | 97.24 | 95.27 |
PGSC0003DMT400072615 | Potato | mitochondrion | 64.83 | 73.44 |
VIT_08s0007g03120.t01 | Wine grape | mitochondrion | 59.31 | 68.8 |
KRH32771 | Soybean | mitochondrion | 52.41 | 59.38 |
KRG96201 | Soybean | cytosol, mitochondrion | 51.72 | 59.06 |
KRH67943 | Soybean | cytosol | 50.34 | 58.87 |
KRH72276 | Soybean | mitochondrion | 51.03 | 57.81 |
Bra017254.1-P | Field mustard | cytosol, mitochondrion | 46.9 | 55.28 |
CDY43741 | Canola | cytosol, mitochondrion | 46.9 | 55.28 |
Bra023055.1-P | Field mustard | cytosol, mitochondrion | 46.9 | 53.54 |
CDX79664 | Canola | mitochondrion | 46.9 | 53.54 |
CDX84572 | Canola | cytosol, mitochondrion | 46.9 | 53.54 |
AT2G36210.1 | Thale cress | mitochondrion | 48.97 | 52.59 |
Bra005293.1-P | Field mustard | mitochondrion | 45.52 | 50.77 |
CDX84150 | Canola | mitochondrion | 45.52 | 50.77 |
CDX75063 | Canola | mitochondrion | 45.52 | 50.77 |
CDY43742 | Canola | mitochondrion | 42.76 | 50.41 |
Bra017255.1-P | Field mustard | mitochondrion | 42.76 | 50.41 |
PGSC0003DMT400035602 | Potato | mitochondrion, plastid | 28.28 | 24.7 |
PGSC0003DMT400007582 | Potato | nucleus | 29.66 | 24.02 |
PGSC0003DMT400035330 | Potato | cytosol | 27.59 | 23.26 |
PGSC0003DMT400053349 | Potato | mitochondrion, plastid | 26.21 | 23.03 |
PGSC0003DMT400007836 | Potato | nucleus | 30.34 | 20.66 |
PGSC0003DMT400023703 | Potato | nucleus | 22.07 | 18.29 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400023116 | EnsemblPlantsGene:PGSC0003DMG400008950 | EntrezGene:107059497 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF28 | PFAM:PF02519 | PGSC:PGSC0003DMG400008950 | RefSeq:XP_015161547.1 |
SEG:seg | UniParc:UPI0002964C23 | UniProt:M1AHT4 | MapMan:35.2 | : | : |
Description
Calmodulin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008950]
Coordinates
chr9:-:2559406..2560266
Molecular Weight (calculated)
16309.3 Da
IEP (calculated)
6.234
GRAVY (calculated)
-0.449
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGKKFGSMK KLAKKAKVIR SPSDNSIHHD QSQHLEYLLV KDDHDHDDQD QEYQGVSPTS AKSSKKMGTF AVYVGEERER FAVPTSYLSH PLFKILLEKT
101: YNEFGFEQTN GLVVPCSVAA FQEVVNAVEC CNGKFDFGGL VEEFL
101: YNEFGFEQTN GLVVPCSVAA FQEVVNAVEC CNGKFDFGGL VEEFL
001: MLGKRIASFK NLAKKMKSIN TTTRSGGEGG SESTYNESLL MNEADEAAMM ASKTPTGTFA VYVGEERVKR VVPTSYLNHP LFRMLLDKSH DEFLCFEQKV
101: MLVVPCSLSV FQDVVNAVES CNGNFDFGEF VEEFL
101: MLVVPCSLSV FQDVVNAVES CNGNFDFGEF VEEFL
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q8L8B9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.