CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005293.1-P	Field mustard	mitochondrion	100.0	100.0
CDX75063	Canola	mitochondrion	100.0	100.0
CDX84572	Canola	cytosol, mitochondrion	83.85	85.83
CDX79664	Canola	mitochondrion	83.08	85.04
CDY43741	Canola	cytosol, mitochondrion	75.38	79.67
AT2G36210.1	Thale cress	mitochondrion	82.31	79.26
CDY43742	Canola	mitochondrion	72.31	76.42
VIT_08s0007g03120.t01	Wine grape	mitochondrion	53.85	56.0
KRH67943	Soybean	cytosol	51.54	54.03
KRH72276	Soybean	mitochondrion	52.31	53.12
KRH32771	Soybean	mitochondrion	52.31	53.12
KRG96201	Soybean	cytosol, mitochondrion	48.46	49.61
Solyc10g083320.1.1	Tomato	mitochondrion	46.92	47.66
PGSC0003DMT400072615	Potato	mitochondrion	46.92	47.66
PGSC0003DMT400023116	Potato	nucleus	50.77	45.52
Solyc09g009980.1.1	Tomato	mitochondrion	51.54	45.27
CDY25398	Canola	cytosol	27.69	30.77
CDY29803	Canola	cytosol	26.92	29.91
CDY12336	Canola	cytosol	30.0	24.53
CDX70944	Canola	cytosol	29.23	22.35
CDY45067	Canola	cytosol	27.69	21.82
CDX88840	Canola	cytosol	28.46	21.76
CDX92434	Canola	cytosol	27.69	21.69
CDY16564	Canola	cytosol	27.69	21.69
CDY20311	Canola	cytosol, mitochondrion, nucleus	23.85	17.71
CDY46148	Canola	cytosol, mitochondrion, nucleus	23.85	17.61
CDY13423	Canola	nucleus	23.08	16.85
CDY36449	Canola	cytosol, nucleus, plastid	23.08	16.48
CDX68733	Canola	nucleus	23.08	15.96
CDY28255	Canola	nucleus	22.31	15.43
CDX72302	Canola	nucleus	23.08	14.35

Protein Annotations

EnsemblPlants:CDX84150	EnsemblPlantsGene:GSBRNA2T00141169001	GO:A0A078D4T4	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF28	PFAM:PF02519	ProteinID:CDX84150	ProteinID:CDX84150.1
SEG:seg	UniParc:UPI0002547C72	MapMan:35.2	:	:	:

Description

BnaC04g09120D

Coordinates

chrLK031836:+:224930..225322

Molecular Weight (calculated)

14484.5 Da

IEP (calculated)

6.931

GRAVY (calculated)

-0.139

Length

130 amino acids

Sequence
(BLAST)

001: MLGKRIASFK NLAKKVKSIN TREGGSESTQ SMSLLMGEAE DTSPAATKTP TGTFAVYVGE ERVRRVVPTS YLKHPLFRML LDKSHDELHC LQQKVMLVIP
101: CSLSVFQDVV NAIESCHGNF DFGDFVEEFL

Best Arabidopsis Sequence Match ( AT2G36210.1 )
(BLAST)

001: MLGKRIASFK NLAKKMKSIN TTTRSGGEGG SESTYNESLL MNEADEAAMM ASKTPTGTFA VYVGEERVKR VVPTSYLNHP LFRMLLDKSH DEFLCFEQKV
101: MLVVPCSLSV FQDVVNAVES CNGNFDFGEF VEEFL

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q8L8B9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.