Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011258.1-P | Field mustard | nucleus | 99.47 | 99.47 |
| CDX68733 | Canola | nucleus | 98.94 | 98.94 |
| CDY13423 | Canola | nucleus | 83.51 | 88.2 |
| CDY36449 | Canola | cytosol, nucleus, plastid | 81.38 | 84.07 |
| AT4G31320.1 | Thale cress | cytosol | 82.45 | 82.01 |
| CDX72302 | Canola | nucleus | 87.23 | 78.47 |
| CDY20311 | Canola | cytosol, mitochondrion, nucleus | 71.28 | 76.57 |
| CDY46148 | Canola | cytosol, mitochondrion, nucleus | 70.74 | 75.57 |
| GSMUA_Achr1P10530_001 | Banana | cytosol | 40.43 | 60.8 |
| KRH16185 | Soybean | nucleus | 55.32 | 58.76 |
| KRH04818 | Soybean | cytosol | 52.13 | 56.65 |
| VIT_04s0008g02800.t01 | Wine grape | plastid | 48.4 | 56.17 |
| KRH52631 | Soybean | plastid | 51.06 | 56.14 |
| GSMUA_Achr9P19570_001 | Banana | cytosol, plastid | 36.17 | 55.74 |
| KRH61972 | Soybean | plastid | 50.0 | 54.97 |
| Zm00001d026262_P001 | Maize | cytosol | 47.34 | 52.66 |
| OQU82277 | Sorghum | nucleus | 47.87 | 52.63 |
| GSMUA_Achr6P03720_001 | Banana | cytosol | 40.96 | 51.33 |
| Os04t0608300-01 | Rice | cytosol | 47.87 | 51.14 |
| Zm00001d002374_P001 | Maize | nucleus | 45.21 | 50.9 |
| EES06266 | Sorghum | cytosol, nucleus, plastid | 31.91 | 48.39 |
| GSMUA_Achr5P24150_001 | Banana | mitochondrion | 30.85 | 48.33 |
| TraesCS6D01G104500.1 | Wheat | cytosol | 30.85 | 46.4 |
| Os02t0143400-00 | Rice | cytosol, mitochondrion | 31.91 | 46.15 |
| TraesCS7A01G418100.1 | Wheat | mitochondrion | 32.45 | 45.52 |
| TraesCS2D01G428000.1 | Wheat | nucleus | 43.09 | 45.51 |
| TraesCS2B01G451000.1 | Wheat | cytosol, mitochondrion, nucleus | 43.09 | 45.25 |
| TraesCS7D01G411100.1 | Wheat | cytosol, mitochondrion, nucleus | 32.45 | 44.85 |
| TraesCS6B01G143500.1 | Wheat | cytosol | 30.32 | 44.53 |
| TraesCS7B01G318200.1 | Wheat | cytosol, mitochondrion, nucleus | 32.45 | 44.53 |
| TraesCS2A01G430400.1 | Wheat | nucleus | 43.09 | 44.51 |
| TraesCS6A01G115700.1 | Wheat | cytosol | 29.79 | 43.75 |
| HORVU2Hr1G100360.1 | Barley | cytosol, mitochondrion, nucleus | 42.02 | 43.65 |
| Zm00001d053884_P001 | Maize | cytosol | 30.32 | 43.18 |
| OQU76999 | Sorghum | cytosol | 30.85 | 40.0 |
| Zm00001d036463_P001 | Maize | cytosol, nucleus, plastid | 29.79 | 38.1 |
| CDY16564 | Canola | cytosol | 32.45 | 36.75 |
| CDX92434 | Canola | cytosol | 31.91 | 36.14 |
| CDY45067 | Canola | cytosol | 31.38 | 35.76 |
| CDY25398 | Canola | cytosol | 21.28 | 34.19 |
| CDY29803 | Canola | cytosol | 21.28 | 34.19 |
| CDX88840 | Canola | cytosol | 29.79 | 32.94 |
| CDX70944 | Canola | cytosol | 29.79 | 32.94 |
| HORVU7Hr1G096880.1 | Barley | mitochondrion | 32.98 | 32.46 |
| CDY12336 | Canola | cytosol | 26.6 | 31.45 |
| Os06t0701900-00 | Rice | mitochondrion | 31.38 | 30.1 |
| CDX84572 | Canola | cytosol, mitochondrion | 15.43 | 22.83 |
| CDX84150 | Canola | mitochondrion | 15.43 | 22.31 |
| CDX75063 | Canola | mitochondrion | 15.43 | 22.31 |
| CDX79664 | Canola | mitochondrion | 14.36 | 21.26 |
| CDY43742 | Canola | mitochondrion | 13.3 | 20.33 |
| CDY43741 | Canola | cytosol, mitochondrion | 12.23 | 18.7 |
Protein Annotations
| EnsemblPlants:CDY28255 | EnsemblPlantsGene:GSBRNA2T00039991001 | GO:A0A078GNX3 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF59 | PFAM:PF02519 | ProteinID:CDY28255 | ProteinID:CDY28255.1 |
| UniParc:UPI0004EDD747 | UniProt:A0A078GNX3 | MapMan:35.2 | : | : | : |
Description
BnaA01g05940DBnaA01g05940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNX3]
Coordinates
chrLK032216:-:489616..490182
Molecular Weight (calculated)
21274.4 Da
IEP (calculated)
9.584
GRAVY (calculated)
-0.656
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSDSAMEA KKSNKIREIV KLQQILKKWR KAAHASKQAS NKIDDEENNN KLNRTGSGSA SKGIKFLKRT LSFTDVTAVP KGYLAVSVGK EEKRYKIPMD
101: YLSHQAFHAL LREAEEEFGF QQAGVLKIPC EVAVFESILK IMEDNKADVY LTTQECRFNA TTEEVISYRH PSDIPRTPSH QPHSPMCR
101: YLSHQAFHAL LREAEEEFGF QQAGVLKIPC EVAVFESILK IMEDNKADVY LTTQECRFNA TTEEVISYRH PSDIPRTPSH QPHSPMCR
001: MEAKKSNKIR EIVKLQQILK KWRKVAHASK QANNNKIDNV DDSNNNISIN INNNGSGSGS GSKSIKFLKR TLSFTDTTAI PKGYLAVSVG KEEKRYKIPT
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
Arabidopsis Description
Auxin induced like-protein [Source:UniProtKB/TrEMBL;Acc:O49581]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.