Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G24400.1 | KRH22182 | AT4G27280.1 | 21798944 |
| AT2G24400.1 | KRH25972 | AT4G27280.1 | 21798944 |
| AT2G24400.1 | KRH27149 | AT4G27280.1 | 21798944 |
| AT2G24400.1 | KRH55477 | AT4G27280.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16185 | Soybean | nucleus | 90.75 | 88.7 |
| KRH61972 | Soybean | plastid | 67.63 | 68.42 |
| KRH52631 | Soybean | plastid | 67.05 | 67.84 |
| VIT_04s0008g02800.t01 | Wine grape | plastid | 60.12 | 64.2 |
| GSMUA_Achr1P10530_001 | Banana | cytosol | 45.66 | 63.2 |
| GSMUA_Achr9P19570_001 | Banana | cytosol, plastid | 41.62 | 59.02 |
| KRH46980 | Soybean | cytosol | 46.82 | 57.04 |
| GSMUA_Achr6P03720_001 | Banana | cytosol | 47.98 | 55.33 |
| AT2G24400.1 | Thale cress | cytosol, mitochondrion, nucleus | 55.49 | 53.93 |
| CDY36449 | Canola | cytosol, nucleus, plastid | 56.65 | 53.85 |
| CDY20311 | Canola | cytosol, mitochondrion, nucleus | 53.76 | 53.14 |
| KRH44681 | Soybean | plastid | 47.4 | 52.9 |
| CDY46148 | Canola | cytosol, mitochondrion, nucleus | 53.76 | 52.84 |
| CDX68733 | Canola | nucleus | 57.23 | 52.66 |
| EES06266 | Sorghum | cytosol, nucleus, plastid | 37.57 | 52.42 |
| CDY28255 | Canola | nucleus | 56.65 | 52.13 |
| Bra011258.1-P | Field mustard | nucleus | 56.65 | 52.13 |
| Bra032097.1-P | Field mustard | cytosol, mitochondrion, nucleus | 53.18 | 51.98 |
| Zm00001d053884_P001 | Maize | cytosol | 39.31 | 51.52 |
| OQU82277 | Sorghum | nucleus | 50.87 | 51.46 |
| AT4G31320.1 | Thale cress | cytosol | 56.07 | 51.32 |
| Zm00001d002374_P001 | Maize | nucleus | 49.13 | 50.9 |
| Os04t0608300-01 | Rice | cytosol | 51.45 | 50.57 |
| CDY13423 | Canola | nucleus | 52.02 | 50.56 |
| Zm00001d026262_P001 | Maize | cytosol | 49.13 | 50.3 |
| Os02t0143400-00 | Rice | cytosol, mitochondrion | 37.57 | 50.0 |
| GSMUA_Achr5P24150_001 | Banana | mitochondrion | 34.68 | 50.0 |
| TraesCS6D01G104500.1 | Wheat | cytosol | 35.84 | 49.6 |
| Bra024013.1-P | Field mustard | nucleus | 54.34 | 49.47 |
| TraesCS7A01G418100.1 | Wheat | mitochondrion | 38.15 | 49.25 |
| TraesCS7D01G411100.1 | Wheat | cytosol, mitochondrion, nucleus | 38.15 | 48.53 |
| TraesCS6B01G143500.1 | Wheat | cytosol | 35.84 | 48.44 |
| TraesCS6A01G115700.1 | Wheat | cytosol | 35.84 | 48.44 |
| TraesCS7B01G318200.1 | Wheat | cytosol, mitochondrion, nucleus | 38.15 | 48.18 |
| TraesCS2D01G428000.1 | Wheat | nucleus | 49.13 | 47.75 |
| TraesCS2B01G451000.1 | Wheat | cytosol, mitochondrion, nucleus | 49.13 | 47.49 |
| HORVU2Hr1G100360.1 | Barley | cytosol, mitochondrion, nucleus | 49.13 | 46.96 |
| TraesCS2A01G430400.1 | Wheat | nucleus | 49.13 | 46.7 |
| CDX72302 | Canola | nucleus | 54.91 | 45.45 |
| OQU76999 | Sorghum | cytosol | 36.99 | 44.14 |
| Zm00001d036463_P001 | Maize | cytosol, nucleus, plastid | 36.42 | 42.86 |
| KRH04133 | Soybean | cytosol | 22.54 | 36.11 |
| KRH12612 | Soybean | mitochondrion | 21.39 | 35.24 |
| HORVU7Hr1G096880.1 | Barley | mitochondrion | 38.73 | 35.08 |
| KRH37551 | Soybean | cytosol | 33.53 | 34.73 |
| KRH19368 | Soybean | cytosol | 30.64 | 33.76 |
| Os06t0701900-00 | Rice | mitochondrion | 37.57 | 33.16 |
| KRH44682 | Soybean | plastid | 22.54 | 28.26 |
| KRH67943 | Soybean | cytosol | 20.23 | 28.23 |
| KRH32771 | Soybean | mitochondrion | 20.81 | 28.12 |
| KRH72276 | Soybean | mitochondrion | 20.81 | 28.12 |
| KRH41418 | Soybean | mitochondrion | 24.86 | 27.92 |
| KRH60128 | Soybean | mitochondrion | 23.7 | 27.33 |
| KRG96201 | Soybean | cytosol, mitochondrion | 19.65 | 26.77 |
| KRH02563 | Soybean | cytosol | 32.95 | 20.36 |
Protein Annotations
| EMBL:ACUP02010559 | EnsemblPlants:KRH04818 | EnsemblPlantsGene:GLYMA_17G189200 | EntrezGene:100779842 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009733 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF59 | PFAM:PF02519 | ProteinID:KRH04818 |
| ProteinID:KRH04818.1 | SEG:seg | UniParc:UPI000233F37F | UniProt:I1MW79 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr17:-:25538297..25538818
Molecular Weight (calculated)
19609.7 Da
IEP (calculated)
8.487
GRAVY (calculated)
-0.368
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSVDLKKSN KIREIVRLKE ILKKWRKIAN SSKSTTTIAT ATSTTSKSMK FLKRTLSLSE REGGSSNVVP KGYLAVCVGE ELKRFTIPTE HLGHQAFQIL
101: LREAEEEFGF QQTGVLRIPC EVAAFESILK MVEGKEDMFS SQECRLSIEE MMIEYCSENQ LAYSHHPQSP LCR
101: LREAEEEFGF QQTGVLRIPC EVAAFESILK MVEGKEDMFS SQECRLSIEE MMIEYCSENQ LAYSHHPQSP LCR
001: MEAKKSNKIR EIVKLQQILK KWRKVAHASK QANNNKIDNV DDSNNNISIN INNNGSGSGS GSKSIKFLKR TLSFTDTTAI PKGYLAVSVG KEEKRYKIPT
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
Arabidopsis Description
Auxin induced like-protein [Source:UniProtKB/TrEMBL;Acc:O49581]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.