CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41418	Soybean	mitochondrion	88.67	86.36
VIT_11s0078g00400.t01	Wine grape	plastid	56.0	51.53
Solyc07g014620.1.1	Tomato	mitochondrion	50.67	50.67
PGSC0003DMT400053349	Potato	mitochondrion, plastid	53.33	48.48
GSMUA_Achr9P14000_001	Banana	mitochondrion	49.33	47.13
PGSC0003DMT400035602	Potato	mitochondrion, plastid	51.33	46.39
GSMUA_Achr3P05530_001	Banana	mitochondrion	44.0	44.3
Solyc05g046320.1.1	Tomato	plastid	49.33	43.02
GSMUA_Achr7P19700_001	Banana	mitochondrion	42.0	42.28
KRH67943	Soybean	cytosol	25.33	30.65
KRG96201	Soybean	cytosol, mitochondrion	25.33	29.92
KRH04133	Soybean	cytosol	21.33	29.63
KRH46980	Soybean	cytosol	27.33	28.87
KRH32771	Soybean	mitochondrion	24.0	28.12
KRH12612	Soybean	mitochondrion	19.33	27.62
KRH72276	Soybean	mitochondrion	23.33	27.34
KRH44681	Soybean	plastid	28.0	27.1
KRH19368	Soybean	cytosol	25.33	24.2
KRH61972	Soybean	plastid	27.33	23.98
KRH37551	Soybean	cytosol	26.67	23.95
KRH04818	Soybean	cytosol	27.33	23.7
KRH52631	Soybean	plastid	26.67	23.39
KRH16185	Soybean	nucleus	27.33	23.16
KRH44682	Soybean	plastid	17.33	18.84
KRH02563	Soybean	cytosol	28.67	15.36

Protein Annotations

EMBL:ACUP02003350	EnsemblPlants:KRH60128	EnsemblPlantsGene:GLYMA_05G221900	EntrezGene:100797463	GO:GO:0008150	GO:GO:0009719
GO:GO:0009733	InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF51	PFAM:PF02519	ProteinID:KRH60128
ProteinID:KRH60128.1	UniParc:UPI0001CAAA35	UniProt:I1K645	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr5:+:40134880..40135808

Molecular Weight (calculated)

16944.8 Da

IEP (calculated)

10.415

GRAVY (calculated)

-0.147

Length

150 amino acids

Sequence
(BLAST)

001: MAGAMGMKVD KIRQIVRLKQ LMTRWKHISL RRRSSDEPSA VRRPPSGFIF VYVGPERTRF AIPARFLNLA LFEGLLKQTE EEFGLRGNGG LVLPCQVPFF
101: SNVVKYLHKD EHKYGSLSLQ DFVNMLSASS SDSCKENVAV FAPLLQKAEV

Best Arabidopsis Sequence Match ( AT3G43120.1 )
(BLAST)

001: MDENNAAKLT GIKQIVRLKE ILQKWQTVTI GSKSDDGELG ARKHTAIISP VINKRLLDLK TCDSDEETTC QSPEPPPDVP KGYLAVYVGP ELRRFIIPTN
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE

Arabidopsis Description

Auxin-responsive protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M249]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.