Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G24400.1 | KRH22182 | AT4G27280.1 | 21798944 |
| AT2G24400.1 | KRH25972 | AT4G27280.1 | 21798944 |
| AT2G24400.1 | KRH27149 | AT4G27280.1 | 21798944 |
| AT2G24400.1 | KRH55477 | AT4G27280.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52631 | Soybean | plastid | 93.57 | 93.57 |
| KRH16185 | Soybean | nucleus | 70.76 | 68.36 |
| KRH04818 | Soybean | cytosol | 68.42 | 67.63 |
| VIT_04s0008g02800.t01 | Wine grape | plastid | 59.06 | 62.35 |
| GSMUA_Achr1P10530_001 | Banana | cytosol | 45.03 | 61.6 |
| GSMUA_Achr9P19570_001 | Banana | cytosol, plastid | 41.52 | 58.2 |
| KRH46980 | Soybean | cytosol | 47.95 | 57.75 |
| EES06266 | Sorghum | cytosol, nucleus, plastid | 39.77 | 54.84 |
| KRH44681 | Soybean | plastid | 49.71 | 54.84 |
| CDY20311 | Canola | cytosol, mitochondrion, nucleus | 53.8 | 52.57 |
| CDY46148 | Canola | cytosol, mitochondrion, nucleus | 53.8 | 52.27 |
| AT2G24400.1 | Thale cress | cytosol, mitochondrion, nucleus | 54.39 | 52.25 |
| CDY36449 | Canola | cytosol, nucleus, plastid | 55.56 | 52.2 |
| AT4G31320.1 | Thale cress | cytosol | 57.31 | 51.85 |
| Os02t0143400-00 | Rice | cytosol, mitochondrion | 39.18 | 51.54 |
| Bra032097.1-P | Field mustard | cytosol, mitochondrion, nucleus | 53.22 | 51.41 |
| TraesCS6D01G104500.1 | Wheat | cytosol | 37.43 | 51.2 |
| Zm00001d053884_P001 | Maize | cytosol | 39.18 | 50.76 |
| CDY13423 | Canola | nucleus | 52.63 | 50.56 |
| Bra011258.1-P | Field mustard | nucleus | 54.97 | 50.0 |
| CDY28255 | Canola | nucleus | 54.97 | 50.0 |
| TraesCS6A01G115700.1 | Wheat | cytosol | 37.43 | 50.0 |
| TraesCS6B01G143500.1 | Wheat | cytosol | 37.43 | 50.0 |
| CDX68733 | Canola | nucleus | 54.97 | 50.0 |
| TraesCS7A01G418100.1 | Wheat | mitochondrion | 39.18 | 50.0 |
| GSMUA_Achr6P03720_001 | Banana | cytosol | 43.86 | 50.0 |
| Bra024013.1-P | Field mustard | nucleus | 54.97 | 49.47 |
| TraesCS7D01G411100.1 | Wheat | cytosol, mitochondrion, nucleus | 39.18 | 49.26 |
| TraesCS7B01G318200.1 | Wheat | cytosol, mitochondrion, nucleus | 39.18 | 48.91 |
| OQU82277 | Sorghum | nucleus | 48.54 | 48.54 |
| Zm00001d026262_P001 | Maize | cytosol | 47.37 | 47.93 |
| Zm00001d002374_P001 | Maize | nucleus | 46.78 | 47.9 |
| GSMUA_Achr5P24150_001 | Banana | mitochondrion | 33.33 | 47.5 |
| Os04t0608300-01 | Rice | cytosol | 48.54 | 47.16 |
| OQU76999 | Sorghum | cytosol | 38.01 | 44.83 |
| CDX72302 | Canola | nucleus | 54.39 | 44.5 |
| TraesCS2D01G428000.1 | Wheat | nucleus | 46.2 | 44.38 |
| TraesCS2B01G451000.1 | Wheat | cytosol, mitochondrion, nucleus | 46.2 | 44.13 |
| TraesCS2A01G430400.1 | Wheat | nucleus | 46.78 | 43.96 |
| Zm00001d036463_P001 | Maize | cytosol, nucleus, plastid | 36.84 | 42.86 |
| HORVU2Hr1G100360.1 | Barley | cytosol, mitochondrion, nucleus | 45.03 | 42.54 |
| KRH04133 | Soybean | cytosol | 22.22 | 35.19 |
| HORVU7Hr1G096880.1 | Barley | mitochondrion | 39.18 | 35.08 |
| KRH12612 | Soybean | mitochondrion | 21.05 | 34.29 |
| KRH19368 | Soybean | cytosol | 30.99 | 33.76 |
| KRH37551 | Soybean | cytosol | 32.75 | 33.53 |
| Os06t0701900-00 | Rice | mitochondrion | 36.84 | 32.14 |
| KRH67943 | Soybean | cytosol | 21.05 | 29.03 |
| KRH44682 | Soybean | plastid | 22.81 | 28.26 |
| KRH72276 | Soybean | mitochondrion | 21.05 | 28.12 |
| KRH32771 | Soybean | mitochondrion | 21.05 | 28.12 |
| KRG96201 | Soybean | cytosol, mitochondrion | 20.47 | 27.56 |
| KRH60128 | Soybean | mitochondrion | 23.98 | 27.33 |
| KRH41418 | Soybean | mitochondrion | 24.56 | 27.27 |
| KRH02563 | Soybean | cytosol | 33.33 | 20.36 |
Protein Annotations
| EMBL:ACUP02002203 | EnsemblPlants:KRH61972 | EnsemblPlantsGene:GLYMA_04G078000 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF59 | PFAM:PF02519 | ProteinID:KRH61972 | ProteinID:KRH61972.1 |
| SEG:seg | UniParc:UPI00023C0711 | UniProt:I1JUP8 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr4:-:6523080..6524075
Molecular Weight (calculated)
19613.7 Da
IEP (calculated)
10.228
GRAVY (calculated)
-0.572
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNPPKKPNK IRDIVRLQQI LKKWRRVANS SKTSRSNNNS NNTTSRSVNF LKRTLSISER EGGGTSNVVP KGYVAVCVGV DLNRFVIPTE YLGHQAFQML
101: LRETEEEFGF EQTGVLRIPC EVSMFESILK IVERKDKFFT QKCRLSIEKM MGYCSSNNLA YSHQPQSPMC R
101: LRETEEEFGF EQTGVLRIPC EVSMFESILK IVERKDKFFT QKCRLSIEKM MGYCSSNNLA YSHQPQSPMC R
001: MEAKKSNKIR EIVKLQQILK KWRKVAHASK QANNNKIDNV DDSNNNISIN INNNGSGSGS GSKSIKFLKR TLSFTDTTAI PKGYLAVSVG KEEKRYKIPT
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
Arabidopsis Description
Auxin induced like-protein [Source:UniProtKB/TrEMBL;Acc:O49581]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.