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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • cytosol 1
  • mitochondrion 6
  • peroxisome 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400053349 Potato mitochondrion, plastid 95.33 86.67
Solyc05g046320.1.1 Tomato plastid 76.67 66.86
VIT_11s0078g00400.t01 Wine grape plastid 59.33 54.6
KRH60128 Soybean mitochondrion 50.67 50.67
GSMUA_Achr7P19700_001 Banana mitochondrion 48.67 48.99
GSMUA_Achr3P05530_001 Banana mitochondrion 47.33 47.65
KRH41418 Soybean mitochondrion 48.0 46.75
VIT_09s0054g00680.t01 Wine grape mitochondrion 50.0 45.73
GSMUA_Achr9P14000_001 Banana mitochondrion 46.67 44.59
Solyc10g083320.1.1 Tomato mitochondrion 26.0 30.47
Solyc12g009280.1.1 Tomato nucleus 32.67 27.37
Solyc09g009980.1.1 Tomato mitochondrion 26.0 26.35
Solyc07g042470.2.1 Tomato cytosol 33.33 24.63
Solyc03g124020.1.1 Tomato nucleus 30.0 23.94
Solyc05g025920.2.1 Tomato nucleus 30.67 23.23
Protein Annotations
EnsemblPlants:Solyc07g014620.1.1EnsemblPlantsGene:Solyc07g014620.1GO:GO:0008150GO:GO:0009719GO:GO:0009733InterPro:SAUR_fam
PANTHER:PTHR31374PANTHER:PTHR31374:SF51PFAM:PF02519UniParc:UPI000276BBD2UniProt:K4CC82MapMan:35.2
Description
No Description!
Coordinates
chr7:-:4983133..4983585
Molecular Weight (calculated)
17092.6 Da
IEP (calculated)
9.839
GRAVY (calculated)
-0.386
Length
150 amino acids
Sequence
(BLAST)
001: MITQIVRLKQ VVKRWKHKSL KRRGVLSYSS SDSDEPVLPG SNRRRRTPSG SLAVYVGPER TRFVIPTRFL NLPVFISLLD KAEEEFGYQR TGGLVLPCEV
101: DYFSEILRLL NRDEDRFGHL GLDEMMNGLD QSCKEAASQG FAPLLHNARV
Best Arabidopsis Sequence Match ( AT5G20810.1 )
(BLAST)
001: MDENNAAKLT GIRQIVRLKE ILQKWQTVTI GPKSEVPPLA AGKQAVAMIS PAINKRLLDV KNGDSDEETC QSPEPPHDVP KGNLAVYVGP ELRRFIIPTS
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q2V359]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.