Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400007836 | Potato | nucleus | 91.92 | 85.45 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 52.02 | 63.19 |
| Solyc12g009280.1.1 | Tomato | nucleus | 55.56 | 61.45 |
| KRH37551 | Soybean | cytosol | 49.49 | 58.68 |
| KRH19368 | Soybean | cytosol | 45.96 | 57.96 |
| Solyc07g042470.2.1 | Tomato | cytosol | 59.09 | 57.64 |
| CDY16564 | Canola | cytosol | 47.98 | 57.23 |
| CDX92434 | Canola | cytosol | 47.98 | 57.23 |
| AT3G43120.1 | Thale cress | cytosol | 45.96 | 56.88 |
| Bra002330.1-P | Field mustard | cytosol | 47.47 | 56.63 |
| CDY12336 | Canola | cytosol | 44.95 | 55.97 |
| Bra034954.1-P | Field mustard | cytosol | 44.95 | 55.97 |
| CDX70944 | Canola | cytosol | 47.98 | 55.88 |
| CDX88840 | Canola | cytosol | 47.47 | 55.29 |
| CDY45067 | Canola | cytosol | 45.45 | 54.55 |
| Bra020127.1-P | Field mustard | cytosol | 45.45 | 54.55 |
| GSMUA_Achr5P22090_001 | Banana | cytosol | 40.91 | 52.6 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 40.91 | 52.6 |
| AT5G20810.2 | Thale cress | cytosol | 47.98 | 50.0 |
| GSMUA_Achr6P31030_001 | Banana | cytosol, mitochondrion | 38.38 | 49.35 |
| KRH12612 | Soybean | mitochondrion | 25.76 | 48.57 |
| KRH04133 | Soybean | cytosol | 25.76 | 47.22 |
| Bra006576.1-P | Field mustard | cytosol | 47.47 | 43.72 |
| Os09t0437400-00 | Rice | cytosol | 39.9 | 41.58 |
| HORVU5Hr1G062580.1 | Barley | cytosol | 35.35 | 40.46 |
| Zm00001d020606_P001 | Maize | cytosol | 38.38 | 39.38 |
| Zm00001d005803_P001 | Maize | cytosol, mitochondrion, nucleus | 35.86 | 39.23 |
| TraesCS5D01G222500.1 | Wheat | cytosol | 34.85 | 37.3 |
| TraesCS5B01G212500.1 | Wheat | cytosol | 34.85 | 37.3 |
| TraesCS5A01G211300.1 | Wheat | cytosol | 34.34 | 36.56 |
| KRH02563 | Soybean | cytosol | 47.98 | 33.93 |
| Solyc10g083320.1.1 | Tomato | mitochondrion | 21.72 | 33.59 |
| EER96781 | Sorghum | cytosol | 40.4 | 32.79 |
| HORVU7Hr1G033340.1 | Barley | cytosol | 26.77 | 31.93 |
| HORVU7Hr1G033320.1 | Barley | cytosol | 12.63 | 30.86 |
| Solyc07g014620.1.1 | Tomato | mitochondrion | 23.23 | 30.67 |
| TraesCS7A01G159100.1 | Wheat | cytosol | 24.24 | 30.38 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 24.24 | 30.38 |
| TraesCS7B01G063600.1 | Wheat | cytosol | 24.24 | 29.27 |
| Solyc05g046320.1.1 | Tomato | plastid | 25.25 | 29.07 |
| Solyc09g009980.1.1 | Tomato | mitochondrion | 21.21 | 28.38 |
| Solyc03g124020.1.1 | Tomato | nucleus | 24.24 | 25.53 |
| Zm00001d045039_P001 | Maize | nucleus | 28.28 | 23.73 |
Protein Annotations
| EnsemblPlants:Solyc05g025920.2.1 | EnsemblPlantsGene:Solyc05g025920.2 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF22 | PFAM:PF02519 | SEG:seg | UniParc:UPI0002765CEB | UniProt:K4BZX9 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:38034093..38036055
Molecular Weight (calculated)
22180.1 Da
IEP (calculated)
9.047
GRAVY (calculated)
-0.773
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAGFSSHNQ SCRGNQRKMD EHGGSKVRGI KQIVRLKEFL SKWQHVTLGP KGNGNNCNNN NNNNNNLGSS LKHGSISPRG ISPSISMRLR NYNIYCDSDE
101: ESCQSPEPPH GVPRGYLAVY VGPELRRFII PTSYLSDPLF KLLLEKVEEE FGFDHTGGVT IPCKTQTFKF LMKCMENHQR DQPSSSLHQH HSGTFSSS
101: ESCQSPEPPH GVPRGYLAVY VGPELRRFII PTSYLSDPLF KLLLEKVEEE FGFDHTGGVT IPCKTQTFKF LMKCMENHQR DQPSSSLHQH HSGTFSSS
001: MDENNAAKLT GIRQIVRLKE ILQKWQTVTI GPKSEVPPLA AGKQAVAMIS PAINKRLLDV KNGDSDEETC QSPEPPHDVP KGNLAVYVGP ELRRFIIPTS
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q2V359]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.