Factsheet for GSMUA_Achr6P31030_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P22090_001	Banana	cytosol	76.62	76.62
GSMUA_Achr7P19840_001	Banana	cytosol	72.08	72.08
PGSC0003DMT400035330	Potato	cytosol	59.74	53.49
VIT_11s0016g00520.t01	Wine grape	cytosol	56.49	53.37
CDY16564	Canola	cytosol	57.14	53.01
CDX92434	Canola	cytosol	57.14	53.01
AT3G43120.1	Thale cress	cytosol	54.55	52.5
Bra002330.1-P	Field mustard	cytosol	56.49	52.41
CDY45067	Canola	cytosol	55.84	52.12
Bra020127.1-P	Field mustard	cytosol	55.84	52.12
Bra034954.1-P	Field mustard	cytosol	53.25	51.57
CDY12336	Canola	cytosol	53.25	51.57
CDX70944	Canola	cytosol	55.84	50.59
CDX88840	Canola	cytosol	55.19	50.0
KRH19368	Soybean	cytosol	50.65	49.68
Solyc12g009280.1.1	Tomato	nucleus	57.14	49.16
KRH37551	Soybean	cytosol	53.25	49.1
PGSC0003DMT400007582	Potato	nucleus	55.19	47.49
KRH12612	Soybean	mitochondrion	31.82	46.67
AT5G20810.2	Thale cress	cytosol	56.49	45.79
Solyc07g042470.2.1	Tomato	cytosol	59.74	45.32
KRH04133	Soybean	cytosol	31.17	44.44
GSMUA_Achr1P10530_001	Banana	cytosol	33.12	40.8
Bra006576.1-P	Field mustard	cytosol	55.19	39.53
PGSC0003DMT400007836	Potato	nucleus	53.25	38.5
Solyc05g025920.2.1	Tomato	nucleus	49.35	38.38
GSMUA_Achr4P05740_001	Banana	cytosol, plastid	37.01	37.25
GSMUA_Achr9P19570_001	Banana	cytosol, plastid	29.22	36.89
GSMUA_Achr5P24150_001	Banana	mitochondrion	28.57	36.67
GSMUA_Achr4P12510_001	Banana	cytosol	17.53	33.33
GSMUA_Achr3P05530_001	Banana	mitochondrion	31.82	32.89
GSMUA_Achr5P24140_001	Banana	extracellular, plastid	31.82	32.03
GSMUA_Achr7P19700_001	Banana	mitochondrion	30.52	31.54
GSMUA_Achr6P03720_001	Banana	cytosol	30.52	31.33
GSMUA_Achr9P14000_001	Banana	mitochondrion	31.82	31.21
KRH02563	Soybean	cytosol	53.25	29.29

Protein Annotations

EnsemblPlants:GSMUA_Achr6P31030_001	EnsemblPlants:GSMUA_Achr6T31030_001	EnsemblPlantsGene:GSMUA_Achr6G31030_001	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF22	PFAM:PF02519	UniParc:UPI000294CE89	UniProt:M0TBP8
MapMan:35.2	:	:	:	:	:

Description

OsSAUR38 - Auxin-responsive SAUR gene family member, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G31030_001]

Coordinates

chr6:-:30940269..30941139

Molecular Weight (calculated)

17215.0 Da

IEP (calculated)

8.594

GRAVY (calculated)

-0.402

Length

154 amino acids

Sequence
(BLAST)

001: MAGKGGKLTG IRQIVRLREI LQKWHSAALR PKEGRRKAAG VPPAVDKRLK SALLLCDSDE ECCRSPEAPP DVPKGYCPVY VGPEQRRFVI PTTYLGLPVF
101: RLLLQKAEEE FGFDHKGALT IPCEIETFKY ILQCMERHAK GLIDDEGNPT GLKE

Best Arabidopsis Sequence Match ( AT5G20810.1 )
(BLAST)

001: MDENNAAKLT GIRQIVRLKE ILQKWQTVTI GPKSEVPPLA AGKQAVAMIS PAINKRLLDV KNGDSDEETC QSPEPPHDVP KGNLAVYVGP ELRRFIIPTS
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q2V359]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.