Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P31030_001 | Banana | cytosol, mitochondrion | 76.62 | 76.62 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 74.68 | 74.68 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 57.14 | 53.99 |
| AT3G43120.1 | Thale cress | cytosol | 55.84 | 53.75 |
| Bra034954.1-P | Field mustard | cytosol | 55.19 | 53.46 |
| CDY12336 | Canola | cytosol | 55.19 | 53.46 |
| PGSC0003DMT400035330 | Potato | cytosol | 58.44 | 52.33 |
| CDX92434 | Canola | cytosol | 55.84 | 51.81 |
| Bra002330.1-P | Field mustard | cytosol | 55.19 | 51.2 |
| CDY16564 | Canola | cytosol | 55.19 | 51.2 |
| KRH37551 | Soybean | cytosol | 55.19 | 50.9 |
| CDY45067 | Canola | cytosol | 53.9 | 50.3 |
| Bra020127.1-P | Field mustard | cytosol | 53.9 | 50.3 |
| HORVU5Hr1G062580.1 | Barley | cytosol | 56.49 | 50.29 |
| KRH19368 | Soybean | cytosol | 50.65 | 49.68 |
| CDX88840 | Canola | cytosol | 53.9 | 48.82 |
| CDX70944 | Canola | cytosol | 53.9 | 48.82 |
| Solyc12g009280.1.1 | Tomato | nucleus | 56.49 | 48.6 |
| TraesCS5B01G212500.1 | Wheat | cytosol | 57.79 | 48.11 |
| Os09t0437400-00 | Rice | cytosol | 59.09 | 47.89 |
| PGSC0003DMT400007582 | Potato | nucleus | 55.19 | 47.49 |
| KRH04133 | Soybean | cytosol | 33.12 | 47.22 |
| Zm00001d020606_P001 | Maize | cytosol | 59.09 | 47.15 |
| TraesCS5D01G222500.1 | Wheat | cytosol | 56.49 | 47.03 |
| Zm00001d005803_P001 | Maize | cytosol, mitochondrion, nucleus | 55.19 | 46.96 |
| TraesCS5A01G211300.1 | Wheat | cytosol | 56.49 | 46.77 |
| KRH12612 | Soybean | mitochondrion | 31.82 | 46.67 |
| AT5G20810.2 | Thale cress | cytosol | 56.49 | 45.79 |
| Solyc07g042470.2.1 | Tomato | cytosol | 58.44 | 44.34 |
| PGSC0003DMT400007836 | Potato | nucleus | 57.14 | 41.31 |
| Solyc05g025920.2.1 | Tomato | nucleus | 52.6 | 40.91 |
| HORVU7Hr1G033320.1 | Barley | cytosol | 20.78 | 39.51 |
| GSMUA_Achr1P10530_001 | Banana | cytosol | 31.82 | 39.2 |
| Bra006576.1-P | Field mustard | cytosol | 53.9 | 38.6 |
| EER96781 | Sorghum | cytosol | 61.04 | 38.52 |
| HORVU7Hr1G033340.1 | Barley | cytosol | 40.26 | 37.35 |
| TraesCS7A01G159100.1 | Wheat | cytosol | 36.36 | 35.44 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 36.36 | 35.44 |
| GSMUA_Achr9P19570_001 | Banana | cytosol, plastid | 27.92 | 35.25 |
| TraesCS7B01G063600.1 | Wheat | cytosol | 36.36 | 34.15 |
| GSMUA_Achr4P05740_001 | Banana | cytosol, plastid | 33.12 | 33.33 |
| GSMUA_Achr4P12510_001 | Banana | cytosol | 16.88 | 32.1 |
| GSMUA_Achr5P24150_001 | Banana | mitochondrion | 24.68 | 31.67 |
| GSMUA_Achr3P05530_001 | Banana | mitochondrion | 30.52 | 31.54 |
| GSMUA_Achr7P19700_001 | Banana | mitochondrion | 29.22 | 30.2 |
| GSMUA_Achr5P24140_001 | Banana | extracellular, plastid | 29.87 | 30.07 |
| GSMUA_Achr6P03720_001 | Banana | cytosol | 28.57 | 29.33 |
| GSMUA_Achr9P14000_001 | Banana | mitochondrion | 29.22 | 28.66 |
| KRH02563 | Soybean | cytosol | 51.3 | 28.21 |
| Zm00001d045039_P001 | Maize | nucleus | 42.86 | 27.97 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P22090_001 | EnsemblPlants:GSMUA_Achr5T22090_001 | EnsemblPlantsGene:GSMUA_Achr5G22090_001 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF22 | PFAM:PF02519 | UniParc:UPI0002957829 | UniProt:M0T0N4 |
| MapMan:35.1 | : | : | : | : | : |
Description
OsSAUR38 - Auxin-responsive SAUR gene family member, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G22090_001]
Coordinates
chr5:-:24218177..24218737
Molecular Weight (calculated)
17308.7 Da
IEP (calculated)
5.079
GRAVY (calculated)
-0.475
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEAGKVTS IWQIVRLREI LQKWQSIALG PKEDRHRASG IPPTVSSRRK DVCVQCDSDE ECCQSPEAPP DVPKGCCPVY VGPEQRRFVI PTSYFSLPVF
101: KLLLEKAEKE FGFDHKGGLT IPCEIETFKY ILQCMDRHGK GLIDDEGNPT GLEE
101: KLLLEKAEKE FGFDHKGGLT IPCEIETFKY ILQCMDRHGK GLIDDEGNPT GLEE
001: MDENNAAKLT GIRQIVRLKE ILQKWQTVTI GPKSEVPPLA AGKQAVAMIS PAINKRLLDV KNGDSDEETC QSPEPPHDVP KGNLAVYVGP ELRRFIIPTS
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q2V359]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.