Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P05740_001 | Banana | cytosol, plastid | 87.65 | 46.41 |
| GSMUA_Achr1P10530_001 | Banana | cytosol | 59.26 | 38.4 |
| GSMUA_Achr9P19570_001 | Banana | cytosol, plastid | 56.79 | 37.7 |
| OQU82277 | Sorghum | nucleus | 72.84 | 34.5 |
| Zm00001d002374_P001 | Maize | nucleus | 70.37 | 34.13 |
| GSMUA_Achr6P03720_001 | Banana | cytosol | 62.96 | 34.0 |
| Zm00001d026262_P001 | Maize | cytosol | 70.37 | 33.73 |
| Os04t0608300-01 | Rice | cytosol | 72.84 | 33.52 |
| GSMUA_Achr5P24150_001 | Banana | mitochondrion | 43.21 | 29.17 |
| TraesCS2D01G428000.1 | Wheat | nucleus | 62.96 | 28.65 |
| TraesCS2B01G451000.1 | Wheat | cytosol, mitochondrion, nucleus | 62.96 | 28.49 |
| TraesCS2A01G430400.1 | Wheat | nucleus | 62.96 | 28.02 |
| HORVU2Hr1G100360.1 | Barley | cytosol, mitochondrion, nucleus | 61.73 | 27.62 |
| GSMUA_Achr7P19840_001 | Banana | cytosol | 35.8 | 18.83 |
| GSMUA_Achr6P31030_001 | Banana | cytosol, mitochondrion | 33.33 | 17.53 |
| GSMUA_Achr5P22090_001 | Banana | cytosol | 32.1 | 16.88 |
| GSMUA_Achr7P19700_001 | Banana | mitochondrion | 30.86 | 16.78 |
| GSMUA_Achr3P05530_001 | Banana | mitochondrion | 29.63 | 16.11 |
| GSMUA_Achr9P14000_001 | Banana | mitochondrion | 30.86 | 15.92 |
| GSMUA_Achr5P24140_001 | Banana | extracellular, plastid | 25.93 | 13.73 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P12510_001 | EnsemblPlants:GSMUA_Achr4T12510_001 | EnsemblPlantsGene:GSMUA_Achr4G12510_001 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF59 | PFAM:PF02519 | UniParc:UPI000295B42C | UniProt:M0SNB6 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative Centromere protein Q [Source:GMGC_GENE;Acc:GSMUA_Achr4G12510_001]
Coordinates
chr4:-:9269917..9270354
Molecular Weight (calculated)
9219.4 Da
IEP (calculated)
8.658
GRAVY (calculated)
-0.281
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MDSKKSNKIT EIVRLQQILK KWKKLAEEFG FQQEGVLRIP CEVAVFESIL KVVEKNKEGL CYCSAEAELA SSHLPPKPVC R
001: MEAKKSNKIR EIVKLQQILK KWRKVAHASK QANNNKIDNV DDSNNNISIN INNNGSGSGS GSKSIKFLKR TLSFTDTTAI PKGYLAVSVG KEEKRYKIPT
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
Arabidopsis Description
Auxin induced like-protein [Source:UniProtKB/TrEMBL;Acc:O49581]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.