Factsheet for TraesCS5D01G222500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G211300.1	Wheat	cytosol	96.22	95.7
TraesCS5B01G212500.1	Wheat	cytosol	95.68	95.68
HORVU5Hr1G062580.1	Barley	cytosol	83.24	89.02
Os09t0437400-00	Rice	cytosol	68.11	66.32
Zm00001d020606_P001	Maize	cytosol	64.32	61.66
Zm00001d005803_P001	Maize	cytosol, mitochondrion, nucleus	59.46	60.77
GSMUA_Achr5P22090_001	Banana	cytosol	47.03	56.49
GSMUA_Achr7P19840_001	Banana	cytosol	46.49	55.84
EER96781	Sorghum	cytosol	65.95	50.0
TraesCS6D01G104500.1	Wheat	cytosol	31.35	46.4
KRH19368	Soybean	cytosol	38.38	45.22
VIT_11s0016g00520.t01	Wine grape	cytosol	39.46	44.79
AT3G43120.1	Thale cress	cytosol	38.38	44.38
CDY16564	Canola	cytosol	39.46	43.98
CDX92434	Canola	cytosol	39.46	43.98
Bra002330.1-P	Field mustard	cytosol	39.46	43.98
PGSC0003DMT400035330	Potato	cytosol	40.54	43.6
CDY12336	Canola	cytosol	37.3	43.4
Bra034954.1-P	Field mustard	cytosol	37.3	43.4
Bra020127.1-P	Field mustard	cytosol	38.38	43.03
CDY45067	Canola	cytosol	38.38	43.03
CDX88840	Canola	cytosol	39.46	42.94
KRH12612	Soybean	mitochondrion	24.32	42.86
TraesCS7D01G411100.1	Wheat	cytosol, mitochondrion, nucleus	31.35	42.65
KRH04133	Soybean	cytosol	24.86	42.59
CDX70944	Canola	cytosol	38.38	41.76
KRH37551	Soybean	cytosol	36.76	40.72
Solyc12g009280.1.1	Tomato	nucleus	38.38	39.66
PGSC0003DMT400007582	Potato	nucleus	37.3	38.55
Solyc07g042470.2.1	Tomato	cytosol	40.54	36.95
AT5G20810.2	Thale cress	cytosol	37.84	36.84
TraesCS7D01G160000.1	Wheat	cytosol	31.35	36.71
Solyc05g025920.2.1	Tomato	nucleus	37.3	34.85
Bra006576.1-P	Field mustard	cytosol	39.46	33.95
PGSC0003DMT400007836	Potato	nucleus	37.84	32.86
TraesCS6D01G104400.1	Wheat	cytosol	21.62	32.0
TraesCS7D01G411000.1	Wheat	mitochondrion	21.08	31.71
TraesCS2D01G428000.1	Wheat	nucleus	28.65	29.78
KRH02563	Soybean	cytosol	38.92	25.71

Protein Annotations

EnsemblPlants:TraesCS5D01G222500.1	EnsemblPlantsGene:TraesCS5D01G222500	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	InterPro:SAUR_fam
PANTHER:PTHR31374	PANTHER:PTHR31374:SF22	PFAM:PF02519	SEG:seg	MapMan:35.2	:

Description

No Description!

Coordinates

chr5D:+:330078362..330079051

Molecular Weight (calculated)

19949.2 Da

IEP (calculated)

4.417

GRAVY (calculated)

-0.377

Length

185 amino acids

Sequence
(BLAST)

001: MGDDGAKAVT TTIVRLRELL HKWALGARGD ADDGEEEEET HAPAAGAGAG AGGAPPSIPP FVLRRLTRTV TVDSDDESCH SPEAAPDVPR GYCPVYVGPE
101: QRRFVIPTGY LGHPVFRLLL EKAEEEFGFR HEGALAIPCD TEAFKYILQC VERHDKGLAA DDVDVDEEGN LRTVLEPASS VRDVS

Best Arabidopsis Sequence Match ( AT3G43120.1 )
(BLAST)

001: MDENNAAKLT GIKQIVRLKE ILQKWQTVTI GSKSDDGELG ARKHTAIISP VINKRLLDLK TCDSDEETTC QSPEPPPDVP KGYLAVYVGP ELRRFIIPTN
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE

Arabidopsis Description

Auxin-responsive protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M249]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.