Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G418000.1 | Wheat | mitochondrion | 96.75 | 96.75 |
| TraesCS7B01G318100.1 | Wheat | mitochondrion | 95.12 | 95.9 |
| EER90331 | Sorghum | mitochondrion | 78.05 | 71.64 |
| Zm00001d014682_P001 | Maize | mitochondrion | 73.17 | 69.23 |
| HORVU7Hr1G096870.1 | Barley | plastid | 92.68 | 62.64 |
| TraesCS6D01G104400.1 | Wheat | cytosol | 49.59 | 48.8 |
| VIT_09s0054g00730.t01 | Wine grape | mitochondrion | 40.65 | 36.5 |
| CDY29803 | Canola | cytosol | 33.33 | 35.04 |
| AT3G20220.1 | Thale cress | cytosol | 33.33 | 34.75 |
| Bra035803.1-P | Field mustard | cytosol | 32.52 | 34.19 |
| CDY25398 | Canola | cytosol | 32.52 | 34.19 |
| VIT_09s0054g00670.t01 | Wine grape | mitochondrion | 39.02 | 34.04 |
| GSMUA_Achr5P24140_001 | Banana | extracellular, plastid | 42.28 | 33.99 |
| TraesCS6D01G104500.1 | Wheat | cytosol | 31.71 | 31.2 |
| TraesCS7D01G411100.1 | Wheat | cytosol, mitochondrion, nucleus | 32.52 | 29.41 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 32.52 | 25.32 |
| KRH44682 | Soybean | plastid | 26.83 | 23.91 |
| TraesCS2D01G428000.1 | Wheat | nucleus | 32.52 | 22.47 |
| TraesCS5D01G222500.1 | Wheat | cytosol | 31.71 | 21.08 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G411000.1 | EnsemblPlantsGene:TraesCS7D01G411000 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF13 | PFAM:PF02519 | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr7D:+:529948353..529948724
Molecular Weight (calculated)
13517.2 Da
IEP (calculated)
9.828
GRAVY (calculated)
-0.573
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MMVMGYFRAP RIGGRRKERK GKAGAAPQAE EAGLREALLE PAGGDVLPKG YFAVYVGEEA RRFVVPTGYL REPAFRDLME RAADEFGFAQ AGGLRVPCAE
101: EDFEELLRRL HRKNGSGSGK GKN
101: EDFEELLRRL HRKNGSGSGK GKN
001: MISLSFIVRL ANQENRRNRR YETNIKDRLV SGELSDGSRP ARDQNGVPRG HLAVYVGREE RQRFVIPTKY LQYPEFRSLM DEVADEFGYD HEGGIHIPCE
101: ESVFEEILIR YMSCDKKK
101: ESVFEEILIR YMSCDKKK
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9LJX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.