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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 4
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d014682_P001 Maize mitochondrion 77.61 80.0
TraesCS7D01G411000.1 Wheat mitochondrion 71.64 78.05
TraesCS7A01G418000.1 Wheat mitochondrion 70.9 77.24
TraesCS7B01G318100.1 Wheat mitochondrion 70.15 77.05
HORVU7Hr1G096870.1 Barley plastid 70.9 52.2
OQU81155 Sorghum plastid 46.27 35.03
GSMUA_Achr5P24140_001 Banana extracellular, plastid 39.55 34.64
VIT_09s0054g00730.t01 Wine grape mitochondrion 35.07 34.31
CDY29803 Canola cytosol 29.1 33.33
AT3G20220.1 Thale cress cytosol 29.1 33.05
EES04503 Sorghum plastid 47.01 32.81
Bra035803.1-P Field mustard cytosol 28.36 32.48
CDY25398 Canola cytosol 28.36 32.48
VIT_09s0054g00670.t01 Wine grape mitochondrion 33.58 31.91
EES06266 Sorghum cytosol, nucleus, plastid 26.87 29.03
OQU76999 Sorghum cytosol 29.1 26.9
KRH44682 Soybean plastid 24.63 23.91
OQU82277 Sorghum nucleus 26.12 20.47
EER96781 Sorghum cytosol 31.34 17.21
Protein Annotations
EnsemblPlants:EER90331EnsemblPlantsGene:SORBI_3010G252500EntrezGene:8063834GO:GO:0008150GO:GO:0009719GO:GO:0009733
InterPro:SAUR_famPANTHER:PTHR31374PANTHER:PTHR31374:SF13PFAM:PF02519ProteinID:EER90331ProteinID:EER90331.1
RefSeq:XP_002438964.1SEG:segUniParc:UPI0001A897BCUniProt:C5Z974MapMan:35.2:
Description
hypothetical protein
Coordinates
chr10:-:59141850..59143133
Molecular Weight (calculated)
14437.1 Da
IEP (calculated)
9.486
GRAVY (calculated)
-0.596
Length
134 amino acids
Sequence
(BLAST)
001: MMVMGYFRST NKSATSAAGG KNKKKAKNSC APAAREEAAG LREALLDQPA AAEEDGGVPK GYFAVYAGEE SRRFVVPTGY LREPAFRDLM ERAADEFGFA
101: QAGGLRVPCA EEDFEDLLRR LQRKNGGAVG KGKK
Best Arabidopsis Sequence Match ( AT3G20220.1 )
(BLAST)
001: MISLSFIVRL ANQENRRNRR YETNIKDRLV SGELSDGSRP ARDQNGVPRG HLAVYVGREE RQRFVIPTKY LQYPEFRSLM DEVADEFGYD HEGGIHIPCE
101: ESVFEEILIR YMSCDKKK
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9LJX7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.