Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0143300-00 | Rice | mitochondrion | 41.67 | 65.57 |
| TraesCS6D01G104400.1 | Wheat | cytosol | 36.98 | 56.8 |
| TraesCS6B01G143400.1 | Wheat | cytosol | 36.98 | 56.8 |
| TraesCS6A01G115600.1 | Wheat | cytosol | 36.98 | 56.8 |
| HORVU6Hr1G020840.1 | Barley | cytosol | 36.46 | 55.56 |
| OQU81155 | Sorghum | plastid | 45.83 | 49.72 |
| EER90331 | Sorghum | mitochondrion | 32.81 | 47.01 |
| CDY29803 | Canola | cytosol | 20.83 | 34.19 |
| GSMUA_Achr5P24140_001 | Banana | extracellular, plastid | 27.08 | 33.99 |
| Bra035803.1-P | Field mustard | cytosol | 20.31 | 33.33 |
| CDY25398 | Canola | cytosol | 20.31 | 33.33 |
| VIT_09s0054g00730.t01 | Wine grape | mitochondrion | 23.44 | 32.85 |
| AT3G20220.1 | Thale cress | cytosol | 19.79 | 32.2 |
| VIT_09s0054g00670.t01 | Wine grape | mitochondrion | 21.88 | 29.79 |
| OQU76999 | Sorghum | cytosol | 21.88 | 28.97 |
| EES06266 | Sorghum | cytosol, nucleus, plastid | 17.71 | 27.42 |
| KRH44682 | Soybean | plastid | 17.71 | 24.64 |
| OQU82277 | Sorghum | nucleus | 18.23 | 20.47 |
| EER96781 | Sorghum | cytosol | 23.96 | 18.85 |
Protein Annotations
| EnsemblPlants:EES04503 | EnsemblPlantsGene:SORBI_3004G038600 | EntrezGene:8073368 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009733 | GO:GO:0016020 | GO:GO:0016021 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF111 |
| PFAM:PF02519 | ProteinID:EES04503 | ProteinID:EES04503.1 | RefSeq:XP_002451527.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0001A85469 | UniProt:C5XUK9 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:3186054..3187787
Molecular Weight (calculated)
20910.1 Da
IEP (calculated)
11.432
GRAVY (calculated)
-0.338
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMTQALNRS RHHFPSDRSL LGARQQLAQL NDKIRSRAGG LVVLGSASAS AMMAIRGYFR APARLQGRKR KQQAAERGLR GDSLGAALLD EAELPAVPRG
101: YFAVYVGAEA RRFVVPTDYL RQPAFRDLME RAAEEFGFAQ AAGIRIPCRE EDFEATVAAL DLESAVARRR SRAGTGRATA AAEPKLPKAR SL
101: YFAVYVGAEA RRFVVPTDYL RQPAFRDLME RAAEEFGFAQ AAGIRIPCRE EDFEATVAAL DLESAVARRR SRAGTGRATA AAEPKLPKAR SL
001: MDENNAAKLT GIKQIVRLKE ILQKWQTVTI GSKSDDGELG ARKHTAIISP VINKRLLDLK TCDSDEETTC QSPEPPPDVP KGYLAVYVGP ELRRFIIPTN
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE
Arabidopsis Description
Auxin-responsive protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M249]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.