Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
- plasma membrane 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G143400.1 | Wheat | cytosol | 98.41 | 99.2 |
| TraesCS6D01G104400.1 | Wheat | cytosol | 97.62 | 98.4 |
| TraesCS6A01G115600.1 | Wheat | cytosol | 97.62 | 98.4 |
| Os02t0143300-00 | Rice | mitochondrion | 64.29 | 66.39 |
| Zm00001d004384_P001 | Maize | mitochondrion | 57.14 | 54.96 |
| OQU81155 | Sorghum | plastid | 58.73 | 41.81 |
| EES04503 | Sorghum | plastid | 55.56 | 36.46 |
| GSMUA_Achr5P24140_001 | Banana | extracellular, plastid | 42.06 | 34.64 |
| HORVU7Hr1G096870.1 | Barley | plastid | 49.21 | 34.07 |
| VIT_09s0054g00730.t01 | Wine grape | mitochondrion | 34.13 | 31.39 |
| CDY29803 | Canola | cytosol | 27.78 | 29.91 |
| VIT_09s0054g00670.t01 | Wine grape | mitochondrion | 32.54 | 29.08 |
| CDY25398 | Canola | cytosol | 26.98 | 29.06 |
| Bra035803.1-P | Field mustard | cytosol | 26.98 | 29.06 |
| HORVU7Hr1G033320.1 | Barley | cytosol | 18.25 | 28.4 |
| AT3G20220.1 | Thale cress | cytosol | 26.19 | 27.97 |
| HORVU7Hr1G033340.1 | Barley | cytosol | 34.92 | 26.51 |
| KRH44682 | Soybean | plastid | 27.78 | 25.36 |
| HORVU5Hr1G062580.1 | Barley | cytosol | 29.37 | 21.39 |
| HORVU2Hr1G100360.1 | Barley | cytosol, mitochondrion, nucleus | 30.16 | 20.99 |
| HORVU7Hr1G096880.1 | Barley | mitochondrion | 30.16 | 19.9 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G020840.1 | EnsemblPlantsGene:HORVU6Hr1G020840 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF111 | PFAM:PF02519 | SEG:seg | UniParc:UPI000295F6BC | UniProt:M0ULM7 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:60483286..60484337
Molecular Weight (calculated)
13642.3 Da
IEP (calculated)
9.953
GRAVY (calculated)
-0.158
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMGYFWAPR KSAAVERDQS LRAGLLVDGG SGGEAAAVPK GYFAVYVGAD ARRFVVPMGY LHQPAFRALM ELAAEEFGFG QAGGLRIPCR EEDFVAIVAA
101: LEATAESRQR RRSAAGRKSR SNATPW
101: LEATAESRQR RRSAAGRKSR SNATPW
1: MAIRLSRVIN SKQSQKQQSR VPKGHVAVYV GEEMESKKRF VVPISYLNHP SFQGLLSRAE EEFGFNHPIG GLTIPCREET FVGLLNSYGC IVST
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9SW54]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.