Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU81155 | Sorghum | plastid | 90.84 | 67.23 |
| Os02t0143300-00 | Rice | mitochondrion | 61.83 | 66.39 |
| TraesCS6A01G115600.1 | Wheat | cytosol | 56.49 | 59.2 |
| TraesCS6B01G143400.1 | Wheat | cytosol | 55.73 | 58.4 |
| TraesCS6D01G104400.1 | Wheat | cytosol | 55.73 | 58.4 |
| HORVU6Hr1G020840.1 | Barley | cytosol | 54.96 | 57.14 |
| Zm00001d014682_P001 | Maize | mitochondrion | 48.09 | 48.46 |
| GSMUA_Achr5P24140_001 | Banana | extracellular, plastid | 39.69 | 33.99 |
| VIT_09s0054g00730.t01 | Wine grape | mitochondrion | 34.35 | 32.85 |
| CDY29803 | Canola | cytosol | 29.01 | 32.48 |
| VIT_09s0054g00670.t01 | Wine grape | mitochondrion | 34.35 | 31.91 |
| Bra035803.1-P | Field mustard | cytosol | 28.24 | 31.62 |
| CDY25398 | Canola | cytosol | 28.24 | 31.62 |
| AT3G20220.1 | Thale cress | cytosol | 28.24 | 31.36 |
| Zm00001d036463_P001 | Maize | cytosol, nucleus, plastid | 31.3 | 27.89 |
| Zm00001d053884_P001 | Maize | cytosol | 27.48 | 27.27 |
| KRH44682 | Soybean | plastid | 28.24 | 26.81 |
| Zm00001d002374_P001 | Maize | nucleus | 31.3 | 24.55 |
| Zm00001d020606_P001 | Maize | cytosol | 34.35 | 23.32 |
| Zm00001d005803_P001 | Maize | cytosol, mitochondrion, nucleus | 32.06 | 23.2 |
| Zm00001d026262_P001 | Maize | cytosol | 29.77 | 23.08 |
| Zm00001d045039_P001 | Maize | nucleus | 32.06 | 17.8 |
Protein Annotations
| EnsemblPlants:Zm00001d004384_P001 | EnsemblPlants:Zm00001d004384_T001 | EnsemblPlantsGene:Zm00001d004384 | EntrezGene:103646803 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009733 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF111 | PFAM:PF02519 | ProteinID:ONM18808.1 |
| SEG:seg | UniParc:UPI000221057C | UniProt:A0A1D6EF18 | MapMan:35.2 | : | : |
Description
SAUR-like auxin-responsive protein family
Coordinates
chr2:-:107710366..107710761
Molecular Weight (calculated)
14479.2 Da
IEP (calculated)
10.393
GRAVY (calculated)
-0.532
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAMGYFRAP RRLYGRKPAE REHRALLVDE DDQGEAAAAA GAVPKGYFAV YVGAESRRFV VRTSYLSHPA FRELMERAAE EFGFAQAGGL RIPCREEDFQ
101: ATVAALEQSR RRGGRARGSP AAGPTRWARA S
101: ATVAALEQSR RRGGRARGSP AAGPTRWARA S
001: MGLMRSMLPN AKQIFKSQSM RNKNGSSSPS TTTTTSGLVP KGHVAVYVGE QMEKKRFVVP ISYLNHPLFR EFLNRAEEEC GFHHSMGGLT IPCREESFLY
101: LITSHQLH
101: LITSHQLH
Arabidopsis Description
At4g34790 [Source:UniProtKB/TrEMBL;Acc:Q9SW55]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.