Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G143400.1 | Wheat | cytosol | 99.2 | 99.2 |
| TraesCS6D01G104400.1 | Wheat | cytosol | 98.4 | 98.4 |
| HORVU6Hr1G020840.1 | Barley | cytosol | 98.4 | 97.62 |
| Os02t0143300-00 | Rice | mitochondrion | 66.4 | 68.03 |
| Zm00001d004384_P001 | Maize | mitochondrion | 59.2 | 56.49 |
| TraesCS7A01G418000.1 | Wheat | mitochondrion | 47.2 | 47.97 |
| OQU81155 | Sorghum | plastid | 60.8 | 42.94 |
| EES04503 | Sorghum | plastid | 56.8 | 36.98 |
| GSMUA_Achr5P24140_001 | Banana | extracellular, plastid | 42.4 | 34.64 |
| VIT_09s0054g00730.t01 | Wine grape | mitochondrion | 36.0 | 32.85 |
| CDY29803 | Canola | cytosol | 28.8 | 30.77 |
| VIT_09s0054g00670.t01 | Wine grape | mitochondrion | 34.4 | 30.5 |
| Bra035803.1-P | Field mustard | cytosol | 28.0 | 29.91 |
| CDY25398 | Canola | cytosol | 28.0 | 29.91 |
| TraesCS7A01G418100.1 | Wheat | mitochondrion | 31.2 | 29.1 |
| TraesCS6A01G115700.1 | Wheat | cytosol | 29.6 | 28.91 |
| AT3G20220.1 | Thale cress | cytosol | 27.2 | 28.81 |
| TraesCS7A01G159100.1 | Wheat | cytosol | 33.6 | 26.58 |
| KRH44682 | Soybean | plastid | 28.0 | 25.36 |
| TraesCS5A01G211300.1 | Wheat | cytosol | 32.0 | 21.51 |
| TraesCS2A01G430400.1 | Wheat | nucleus | 30.4 | 20.88 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G115600.1 | EnsemblPlantsGene:TraesCS6A01G115600 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF111 | PFAM:PF02519 | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6A:+:85573013..85573390
Molecular Weight (calculated)
13629.3 Da
IEP (calculated)
9.953
GRAVY (calculated)
-0.159
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMGYFWAPR KSAAVERDQS LRAGLLVDGG SGEAAAVPKG YFAVYVGAEA RRFVVPMSYL HQPAFRALME LAAEEFGFGQ AGGLRIPCRE EDFVAIVAAL
101: EATAESRQRR RSAAGRKSRS NATPW
101: EATAESRQRR RSAAGRKSRS NATPW
1: MAMMRGILAA RKILTSKAAS TPKGFLAVYV GESQKKRYMV PVSFLNQPSF QALLSTAEEE FGFDHPMGGL TIPCPEDTFV AAASQL
Arabidopsis Description
At2g21200 [Source:UniProtKB/TrEMBL;Acc:Q9SKP3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.