CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035803.1-P	Field mustard	cytosol	100.0	100.0
CDY29803	Canola	cytosol	99.15	99.15
AT3G20220.1	Thale cress	cytosol	88.03	87.29
VIT_09s0054g00730.t01	Wine grape	mitochondrion	46.15	39.42
VIT_09s0054g00670.t01	Wine grape	mitochondrion	43.59	36.17
TraesCS7D01G411000.1	Wheat	mitochondrion	34.19	32.52
TraesCS7B01G318100.1	Wheat	mitochondrion	33.33	31.97
KRH44682	Soybean	plastid	37.61	31.88
TraesCS7A01G418000.1	Wheat	mitochondrion	33.33	31.71
Os02t0143300-00	Rice	mitochondrion	31.62	30.33
Zm00001d014682_P001	Maize	mitochondrion	32.48	29.23
EER90331	Sorghum	mitochondrion	32.48	28.36
CDX84572	Canola	cytosol, mitochondrion	30.77	28.35
CDX79664	Canola	mitochondrion	30.77	28.35
Zm00001d004384_P001	Maize	mitochondrion	31.62	28.24
TraesCS6A01G115600.1	Wheat	cytosol	29.91	28.0
TraesCS6B01G143400.1	Wheat	cytosol	29.91	28.0
TraesCS6D01G104400.1	Wheat	cytosol	29.91	28.0
CDX75063	Canola	mitochondrion	30.77	27.69
CDX84150	Canola	mitochondrion	30.77	27.69
HORVU6Hr1G020840.1	Barley	cytosol	29.06	26.98
GSMUA_Achr5P24140_001	Banana	extracellular, plastid	35.04	26.8
CDY45067	Canola	cytosol	36.75	26.06
CDY12336	Canola	cytosol	34.19	25.16
CDX88840	Canola	cytosol	35.9	24.71
CDY16564	Canola	cytosol	35.04	24.7
CDY43742	Canola	mitochondrion	25.64	24.39
CDX70944	Canola	cytosol	35.04	24.12
CDX92434	Canola	cytosol	34.19	24.1
CDY46148	Canola	cytosol, mitochondrion, nucleus	35.04	23.3
CDY13423	Canola	nucleus	35.04	23.03
CDY20311	Canola	cytosol, mitochondrion, nucleus	34.19	22.86
CDY43741	Canola	cytosol, mitochondrion	23.93	22.76
OQU81155	Sorghum	plastid	34.19	22.6
CDY36449	Canola	cytosol, nucleus, plastid	35.04	22.53
CDX68733	Canola	nucleus	35.04	21.81
HORVU7Hr1G096870.1	Barley	plastid	33.33	21.43
CDY28255	Canola	nucleus	34.19	21.28
EES04503	Sorghum	plastid	33.33	20.31
CDX72302	Canola	nucleus	35.04	19.62

Protein Annotations

EnsemblPlants:CDY25398	EnsemblPlantsGene:GSBRNA2T00029528001	GO:A0A078GLA2	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31929	PANTHER:PTHR31929:SF25	PFAM:PF02519	ProteinID:CDY25398	ProteinID:CDY25398.1
UniParc:UPI0002547BD7	UniProt:A0A078GLA2	MapMan:35.1	:	:	:

Description

BnaA05g18860DBnaA05g18860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLA2]

Coordinates

chrLK032174:+:504623..504976

Molecular Weight (calculated)

13723.5 Da

IEP (calculated)

7.507

GRAVY (calculated)

-0.669

Length

117 amino acids

Sequence
(BLAST)

001: MISLDFIVRL KNQEKRRNRR SETNIKASLL SGELSDGRRR ARDQNGVPRG HLAVYVGDEM QRFVIPTKYL QYPEFKVLMD EVADEFGYEH EGGIHIPCEE
101: SVFEEILIRY MSCDKKK

Best Arabidopsis Sequence Match ( AT3G20220.1 )
(BLAST)

001: MISLSFIVRL ANQENRRNRR YETNIKDRLV SGELSDGSRP ARDQNGVPRG HLAVYVGREE RQRFVIPTKY LQYPEFRSLM DEVADEFGYD HEGGIHIPCE
101: ESVFEEILIR YMSCDKKK

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9LJX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.