Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G318100.1 | Wheat | mitochondrion | 62.64 | 93.44 |
| TraesCS7D01G411000.1 | Wheat | mitochondrion | 62.64 | 92.68 |
| TraesCS7A01G418000.1 | Wheat | mitochondrion | 62.64 | 92.68 |
| EER90331 | Sorghum | mitochondrion | 52.2 | 70.9 |
| Zm00001d014682_P001 | Maize | mitochondrion | 46.15 | 64.62 |
| HORVU6Hr1G020840.1 | Barley | cytosol | 34.07 | 49.21 |
| GSMUA_Achr5P24140_001 | Banana | extracellular, plastid | 30.77 | 36.6 |
| VIT_09s0054g00730.t01 | Wine grape | mitochondrion | 26.37 | 35.04 |
| CDY29803 | Canola | cytosol | 21.98 | 34.19 |
| AT3G20220.1 | Thale cress | cytosol | 21.98 | 33.9 |
| Bra035803.1-P | Field mustard | cytosol | 21.43 | 33.33 |
| CDY25398 | Canola | cytosol | 21.43 | 33.33 |
| VIT_09s0054g00670.t01 | Wine grape | mitochondrion | 25.27 | 32.62 |
| HORVU7Hr1G033320.1 | Barley | cytosol | 12.64 | 28.4 |
| HORVU7Hr1G033340.1 | Barley | cytosol | 24.73 | 27.11 |
| KRH44682 | Soybean | plastid | 18.68 | 24.64 |
| HORVU5Hr1G062580.1 | Barley | cytosol | 21.43 | 22.54 |
| HORVU2Hr1G100360.1 | Barley | cytosol, mitochondrion, nucleus | 21.98 | 22.1 |
| HORVU7Hr1G096880.1 | Barley | mitochondrion | 23.08 | 21.99 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G096870.1 | EnsemblPlantsGene:HORVU7Hr1G096870 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF13 | PFAM:PF02519 | SEG:seg | UniParc:UPI000B485070 | UniProt:A0A287XGN2 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:589967619..589968858
Molecular Weight (calculated)
20103.5 Da
IEP (calculated)
11.020
GRAVY (calculated)
-0.558
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRHQLHLPH ALIDRPIGPC HPRTPPARCT AACVRTVLLL RRRRREPLLP RPATMMVMGY LRAPRIGGRK KKEKKSKAGA APRAEDAGLR EALLEPAGSD
101: GGGVLPKGYF AVYVGEDARR FVVPTGYLRE PAFRDLMERA ADEFGFAQAG GLRVPCAEED FEELLRRLHR KNSGSGSGRG KN
101: GGGVLPKGYF AVYVGEDARR FVVPTGYLRE PAFRDLMERA ADEFGFAQAG GLRVPCAEED FEELLRRLHR KNSGSGSGRG KN
1: MAIRIPRVLQ SSKQILRQAK LLSSSSSSSS LDVPKGYLAV YVGEQNMKRF VVPVSYLDQP SFQDLLRKAE EEFGFDHPMG GLTIPCSEEI FIDLASRFN
Arabidopsis Description
At4g38840 [Source:UniProtKB/TrEMBL;Acc:Q9T0J2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.