Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G411000.1 | Wheat | mitochondrion | 95.9 | 95.12 |
| TraesCS7A01G418000.1 | Wheat | mitochondrion | 95.9 | 95.12 |
| EER90331 | Sorghum | mitochondrion | 77.05 | 70.15 |
| Zm00001d014682_P001 | Maize | mitochondrion | 70.49 | 66.15 |
| HORVU7Hr1G096870.1 | Barley | plastid | 93.44 | 62.64 |
| TraesCS6B01G143400.1 | Wheat | cytosol | 50.0 | 48.8 |
| VIT_09s0054g00730.t01 | Wine grape | mitochondrion | 40.16 | 35.77 |
| CDY29803 | Canola | cytosol | 32.79 | 34.19 |
| AT3G20220.1 | Thale cress | cytosol | 32.79 | 33.9 |
| Bra035803.1-P | Field mustard | cytosol | 31.97 | 33.33 |
| VIT_09s0054g00670.t01 | Wine grape | mitochondrion | 38.52 | 33.33 |
| GSMUA_Achr5P24140_001 | Banana | extracellular, plastid | 41.8 | 33.33 |
| CDY25398 | Canola | cytosol | 31.97 | 33.33 |
| TraesCS6B01G143500.1 | Wheat | cytosol | 31.15 | 29.69 |
| TraesCS7B01G318200.1 | Wheat | cytosol, mitochondrion, nucleus | 31.15 | 27.74 |
| TraesCS7B01G063600.1 | Wheat | cytosol | 31.97 | 23.78 |
| KRH44682 | Soybean | plastid | 26.23 | 23.19 |
| TraesCS2B01G451000.1 | Wheat | cytosol, mitochondrion, nucleus | 31.97 | 21.79 |
| TraesCS5B01G212500.1 | Wheat | cytosol | 30.33 | 20.0 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G318100.1 | EnsemblPlantsGene:TraesCS7B01G318100 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF13 | PFAM:PF02519 | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr7B:+:568092912..568093280
Molecular Weight (calculated)
13490.2 Da
IEP (calculated)
9.804
GRAVY (calculated)
-0.553
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MMVMGYFRAP RIGGRRKEKK SKAGAAPQAE EAGLREALLE PAGGVLPKGY FAVYVGEEAR RFVVPTGYLR EPAFRDLMER AADEFGFAQA DGLRVPCVEE
101: DFEELLRRLH RKNGSGSGKG KN
101: DFEELLRRLH RKNGSGSGKG KN
001: MISLSFIVRL ANQENRRNRR YETNIKDRLV SGELSDGSRP ARDQNGVPRG HLAVYVGREE RQRFVIPTKY LQYPEFRSLM DEVADEFGYD HEGGIHIPCE
101: ESVFEEILIR YMSCDKKK
101: ESVFEEILIR YMSCDKKK
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9LJX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.