Factsheet for Bra035803.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25398	Canola	cytosol	100.0	100.0
CDY29803	Canola	cytosol	99.15	99.15
AT3G20220.1	Thale cress	cytosol	88.03	87.29
VIT_09s0054g00730.t01	Wine grape	mitochondrion	46.15	39.42
VIT_09s0054g00670.t01	Wine grape	mitochondrion	43.59	36.17
TraesCS7D01G411000.1	Wheat	mitochondrion	34.19	32.52
TraesCS7B01G318100.1	Wheat	mitochondrion	33.33	31.97
KRH44682	Soybean	plastid	37.61	31.88
TraesCS7A01G418000.1	Wheat	mitochondrion	33.33	31.71
Os02t0143300-00	Rice	mitochondrion	31.62	30.33
Zm00001d014682_P001	Maize	mitochondrion	32.48	29.23
EER90331	Sorghum	mitochondrion	32.48	28.36
Bra023055.1-P	Field mustard	cytosol, mitochondrion	30.77	28.35
Zm00001d004384_P001	Maize	mitochondrion	31.62	28.24
TraesCS6B01G143400.1	Wheat	cytosol	29.91	28.0
TraesCS6D01G104400.1	Wheat	cytosol	29.91	28.0
TraesCS6A01G115600.1	Wheat	cytosol	29.91	28.0
Bra005293.1-P	Field mustard	mitochondrion	30.77	27.69
HORVU6Hr1G020840.1	Barley	cytosol	29.06	26.98
GSMUA_Achr5P24140_001	Banana	extracellular, plastid	35.04	26.8
Bra020127.1-P	Field mustard	cytosol	36.75	26.06
Bra034954.1-P	Field mustard	cytosol	34.19	25.16
Bra017255.1-P	Field mustard	mitochondrion	25.64	24.39
Bra002330.1-P	Field mustard	cytosol	34.19	24.1
Bra017254.1-P	Field mustard	cytosol, mitochondrion	23.93	22.76
OQU81155	Sorghum	plastid	34.19	22.6
Bra032097.1-P	Field mustard	cytosol, mitochondrion, nucleus	34.19	22.6
Bra024013.1-P	Field mustard	nucleus	35.04	21.58
HORVU7Hr1G096870.1	Barley	plastid	33.33	21.43
Bra011258.1-P	Field mustard	nucleus	34.19	21.28
EES04503	Sorghum	plastid	33.33	20.31
Bra006576.1-P	Field mustard	cytosol	35.9	19.53

Protein Annotations

EnsemblPlants:Bra035803.1	EnsemblPlants:Bra035803.1-P	EnsemblPlantsGene:Bra035803	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31929	PANTHER:PTHR31929:SF25	PFAM:PF02519	UniParc:UPI0002547BD7	UniProt:M4F403
MapMan:35.1	:	:	:	:	:

Description

AT3G20220 (E=2e-054) | auxin-responsive protein, putative

Coordinates

chrA05:-:17280264..17280617

Molecular Weight (calculated)

13723.5 Da

IEP (calculated)

7.507

GRAVY (calculated)

-0.669

Length

117 amino acids

Sequence
(BLAST)

001: MISLDFIVRL KNQEKRRNRR SETNIKASLL SGELSDGRRR ARDQNGVPRG HLAVYVGDEM QRFVIPTKYL QYPEFKVLMD EVADEFGYEH EGGIHIPCEE
101: SVFEEILIRY MSCDKKK

Best Arabidopsis Sequence Match ( AT3G20220.1 )
(BLAST)

001: MISLSFIVRL ANQENRRNRR YETNIKDRLV SGELSDGSRP ARDQNGVPRG HLAVYVGREE RQRFVIPTKY LQYPEFRSLM DEVADEFGYD HEGGIHIPCE
101: ESVFEEILIR YMSCDKKK

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q9LJX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.