Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43742 | Canola | mitochondrion | 100.0 | 100.0 |
| Bra017254.1-P | Field mustard | cytosol, mitochondrion | 82.93 | 82.93 |
| Bra023055.1-P | Field mustard | cytosol, mitochondrion | 75.61 | 73.23 |
| Bra005293.1-P | Field mustard | mitochondrion | 76.42 | 72.31 |
| AT2G36210.1 | Thale cress | mitochondrion | 70.73 | 64.44 |
| VIT_08s0007g03120.t01 | Wine grape | mitochondrion | 52.03 | 51.2 |
| KRH72276 | Soybean | mitochondrion | 52.85 | 50.78 |
| KRH32771 | Soybean | mitochondrion | 52.03 | 50.0 |
| KRH67943 | Soybean | cytosol | 49.59 | 49.19 |
| KRG96201 | Soybean | cytosol, mitochondrion | 47.97 | 46.46 |
| Solyc10g083320.1.1 | Tomato | mitochondrion | 47.97 | 46.09 |
| PGSC0003DMT400072615 | Potato | mitochondrion | 47.97 | 46.09 |
| PGSC0003DMT400023116 | Potato | nucleus | 50.41 | 42.76 |
| Solyc09g009980.1.1 | Tomato | mitochondrion | 50.41 | 41.89 |
| Bra035803.1-P | Field mustard | cytosol | 24.39 | 25.64 |
| Bra034954.1-P | Field mustard | cytosol | 26.02 | 20.13 |
| Bra020127.1-P | Field mustard | cytosol | 25.2 | 18.79 |
| Bra002330.1-P | Field mustard | cytosol | 25.2 | 18.67 |
| Bra006576.1-P | Field mustard | cytosol | 26.83 | 15.35 |
| Bra032097.1-P | Field mustard | cytosol, mitochondrion, nucleus | 20.33 | 14.12 |
| Bra011258.1-P | Field mustard | nucleus | 20.33 | 13.3 |
| Bra024013.1-P | Field mustard | nucleus | 19.51 | 12.63 |
Protein Annotations
| EnsemblPlants:Bra017255.1 | EnsemblPlants:Bra017255.1-P | EnsemblPlantsGene:Bra017255 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF28 | PFAM:PF02519 | UniParc:UPI000254405B | UniProt:M4DL74 |
| MapMan:35.2 | : | : | : | : | : |
Description
AT2G36210 (E=3e-035) | auxin-responsive family protein
Coordinates
chrA04:-:15724772..15725143
Molecular Weight (calculated)
13909.9 Da
IEP (calculated)
7.346
GRAVY (calculated)
-0.169
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGKRIASFK NLAKKVKRIK TRERGSEYVL LGEGDDISPT KTSTGTFPVY VGEERVRQVV PMSYLNHLIF RMLLDKSRDE FHCSDQKVML VVPCSLSAFQ
101: DVVNAIESCS GNFDLGDFVE ELL
101: DVVNAIESCS GNFDLGDFVE ELL
001: MLGKRIASFK NLAKKMKSIN TTTRSGGEGG SESTYNESLL MNEADEAAMM ASKTPTGTFA VYVGEERVKR VVPTSYLNHP LFRMLLDKSH DEFLCFEQKV
101: MLVVPCSLSV FQDVVNAVES CNGNFDFGEF VEEFL
101: MLVVPCSLSV FQDVVNAVES CNGNFDFGEF VEEFL
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q8L8B9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.