Factsheet for VIT_08s0007g03120.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
nucleus 2
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32771	Soybean	mitochondrion	75.2	73.44
KRH67943	Soybean	cytosol	72.0	72.58
KRH72276	Soybean	mitochondrion	73.6	71.88
KRG96201	Soybean	cytosol, mitochondrion	72.8	71.65
PGSC0003DMT400072615	Potato	mitochondrion	66.4	64.84
Solyc10g083320.1.1	Tomato	mitochondrion	65.6	64.06
PGSC0003DMT400023116	Potato	nucleus	68.8	59.31
Solyc09g009980.1.1	Tomato	mitochondrion	68.8	58.11
Bra023055.1-P	Field mustard	cytosol, mitochondrion	56.8	55.91
CDX79664	Canola	mitochondrion	56.8	55.91
CDX84572	Canola	cytosol, mitochondrion	56.8	55.91
AT2G36210.1	Thale cress	mitochondrion	60.0	55.56
Bra005293.1-P	Field mustard	mitochondrion	56.0	53.85
CDX84150	Canola	mitochondrion	56.0	53.85
CDX75063	Canola	mitochondrion	56.0	53.85
CDY43741	Canola	cytosol, mitochondrion	52.0	52.85
Bra017254.1-P	Field mustard	cytosol, mitochondrion	52.0	52.85
CDY43742	Canola	mitochondrion	51.2	52.03
Bra017255.1-P	Field mustard	mitochondrion	51.2	52.03
VIT_09s0054g00730.t01	Wine grape	mitochondrion	30.4	27.74
VIT_09s0054g00670.t01	Wine grape	mitochondrion	30.4	26.95
VIT_11s0016g00520.t01	Wine grape	cytosol	34.4	26.38
VIT_11s0078g00400.t01	Wine grape	plastid	34.4	26.38
VIT_04s0008g02800.t01	Wine grape	plastid	30.4	23.46
VIT_09s0054g00680.t01	Wine grape	mitochondrion	29.6	22.56
VIT_09s0054g00660.t01	Wine grape	cytosol, plastid	28.8	20.81
VIT_09s0054g00740.t01	Wine grape	cytosol, plastid	28.0	19.77

Protein Annotations

EntrezGene:100252898	wikigene:100252898	MapMan:35.2	EMBL:AM427698	ProteinID:CAN71368	ProteinID:CAN71368.1
ProteinID:CBI30314	ProteinID:CBI30314.3	UniProt:D7TJ88	EMBL:FN595991	GO:GO:0008150	GO:GO:0009719
GO:GO:0009733	EntrezGene:LOC100252898	wikigene:LOC100252898	PFAM:PF02519	PANTHER:PTHR31374	PANTHER:PTHR31374:SF28
InterPro:SAUR_fam	UniParc:UPI00015C9EB8	ArrayExpress:VIT_08s0007g03120	EnsemblPlantsGene:VIT_08s0007g03120	EnsemblPlants:VIT_08s0007g03120.t01	RefSeq:XP_002282286
RefSeq:XP_002282286.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:-:17142119..17142617

Molecular Weight (calculated)

13882.7 Da

IEP (calculated)

6.764

GRAVY (calculated)

-0.206

Length

125 amino acids

Sequence
(BLAST)

001: MLGKKMGSVK KLVKKVKVIG GGDREPSHHE CLLRDYEEGS PSGTTPTGSF AVYVGEERQR FVVPTSFLSH PLFKMLLEKA YNEFGFDQRN GLVVPCSVST
101: FQEVVNAVEC CNGKFDFGNL VEEFV

Best Arabidopsis Sequence Match ( AT2G36210.1 )
(BLAST)

001: MLGKRIASFK NLAKKMKSIN TTTRSGGEGG SESTYNESLL MNEADEAAMM ASKTPTGTFA VYVGEERVKR VVPTSYLNHP LFRMLLDKSH DEFLCFEQKV
101: MLVVPCSLSV FQDVVNAVES CNGNFDFGEF VEEFL

Arabidopsis Description

SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q8L8B9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.