Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0054g00660.t01 | Wine grape | cytosol, plastid | 94.35 | 96.53 |
| KRH46980 | Soybean | cytosol | 57.63 | 71.83 |
| KRH44681 | Soybean | plastid | 60.45 | 69.03 |
| GSMUA_Achr1P10530_001 | Banana | cytosol | 48.59 | 68.8 |
| VIT_04s0008g02800.t01 | Wine grape | plastid | 58.19 | 63.58 |
| GSMUA_Achr9P19570_001 | Banana | cytosol, plastid | 42.94 | 62.3 |
| GSMUA_Achr6P03720_001 | Banana | cytosol | 51.98 | 61.33 |
| GSMUA_Achr5P24150_001 | Banana | mitochondrion | 40.68 | 60.0 |
| EES06266 | Sorghum | cytosol, nucleus, plastid | 40.11 | 57.26 |
| Os02t0143400-00 | Rice | cytosol, mitochondrion | 40.11 | 54.62 |
| TraesCS6D01G104500.1 | Wheat | cytosol | 38.42 | 54.4 |
| Zm00001d002374_P001 | Maize | nucleus | 50.85 | 53.89 |
| OQU82277 | Sorghum | nucleus | 51.98 | 53.8 |
| Zm00001d026262_P001 | Maize | cytosol | 50.85 | 53.25 |
| TraesCS6B01G143500.1 | Wheat | cytosol | 37.85 | 52.34 |
| TraesCS6A01G115700.1 | Wheat | cytosol | 37.85 | 52.34 |
| Os04t0608300-01 | Rice | cytosol | 51.98 | 52.27 |
| TraesCS7A01G418100.1 | Wheat | mitochondrion | 38.98 | 51.49 |
| Zm00001d053884_P001 | Maize | cytosol | 37.85 | 50.76 |
| TraesCS7D01G411100.1 | Wheat | cytosol, mitochondrion, nucleus | 38.98 | 50.74 |
| TraesCS7B01G318200.1 | Wheat | cytosol, mitochondrion, nucleus | 38.98 | 50.37 |
| TraesCS2D01G428000.1 | Wheat | nucleus | 48.59 | 48.31 |
| TraesCS2B01G451000.1 | Wheat | cytosol, mitochondrion, nucleus | 48.59 | 48.04 |
| TraesCS2A01G430400.1 | Wheat | nucleus | 48.59 | 47.25 |
| HORVU2Hr1G100360.1 | Barley | cytosol, mitochondrion, nucleus | 48.02 | 46.96 |
| PGSC0003DMT400023703 | Potato | nucleus | 46.33 | 46.86 |
| OQU76999 | Sorghum | cytosol | 37.85 | 46.21 |
| Zm00001d036463_P001 | Maize | cytosol, nucleus, plastid | 37.85 | 45.58 |
| Solyc03g124020.1.1 | Tomato | nucleus | 48.02 | 45.21 |
| HORVU7Hr1G096880.1 | Barley | mitochondrion | 38.42 | 35.6 |
| VIT_11s0016g00520.t01 | Wine grape | cytosol | 31.64 | 34.36 |
| Os06t0701900-00 | Rice | mitochondrion | 37.29 | 33.67 |
| VIT_09s0054g00730.t01 | Wine grape | mitochondrion | 25.42 | 32.85 |
| VIT_11s0078g00400.t01 | Wine grape | plastid | 27.68 | 30.06 |
| VIT_09s0054g00670.t01 | Wine grape | mitochondrion | 23.73 | 29.79 |
| VIT_09s0054g00680.t01 | Wine grape | mitochondrion | 26.55 | 28.66 |
| VIT_08s0007g03120.t01 | Wine grape | mitochondrion | 19.77 | 28.0 |
Protein Annotations
| EntrezGene:100242742 | wikigene:100242742 | MapMan:35.2 | EMBL:AM486907 | ProteinID:CAN62212 | ProteinID:CAN62212.1 |
| ProteinID:CCB45058 | ProteinID:CCB45058.1 | UniProt:F6GYM2 | EMBL:FN594972 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009733 | EntrezGene:LOC100242742 | wikigene:LOC100242742 | PFAM:PF02519 | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF6 |
| InterPro:SAUR_fam | UniParc:UPI0001984022 | ArrayExpress:VIT_09s0054g00740 | EnsemblPlantsGene:VIT_09s0054g00740 | EnsemblPlants:VIT_09s0054g00740.t01 | RefSeq:XP_002266916 |
| RefSeq:XP_002266916.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr9:-:21572109..21572643
Molecular Weight (calculated)
19874.0 Da
IEP (calculated)
8.840
GRAVY (calculated)
-0.357
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSKKSNKIS EIVRLQQILK KWKKLANAPK NSNKNGSHSS TSSSSNNGSK SIKFLKKTLS FTDTTSMLST EVVPKGFLAV CVGKELKRFI IPTEYLGHQA
101: FGVLLREAEE EFGFQQEGVL KIPCEVAVFE RILKVVEEKR DVFFLHEFGL NAEKEMIGCC SSSDCELTPS HHPQMCR
101: FGVLLREAEE EFGFQQEGVL KIPCEVAVFE RILKVVEEKR DVFFLHEFGL NAEKEMIGCC SSSDCELTPS HHPQMCR
001: MEAKKSNKIR EIVKLQQILK KWRKVAHASK QANNNKIDNV DDSNNNISIN INNNGSGSGS GSKSIKFLKR TLSFTDTTAI PKGYLAVSVG KEEKRYKIPT
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
101: EYLSHQAFHV LLREAEEEFG FEQAGILRIP CEVAVFESIL KIMEDNKSDA YLTTQECRFN ATSEEVMSYR HPSDCPRTPS HQPHSPMCR
Arabidopsis Description
Auxin induced like-protein [Source:UniProtKB/TrEMBL;Acc:O49581]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.