Factsheet for PGSC0003DMT400023703

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g124020.1.1	Tomato	nucleus	93.14	86.7
GSMUA_Achr1P10530_001	Banana	cytosol	41.71	58.4
KRH46980	Soybean	cytosol	44.57	54.93
GSMUA_Achr6P03720_001	Banana	cytosol	45.71	53.33
KRH44681	Soybean	plastid	45.14	50.97
GSMUA_Achr9P19570_001	Banana	cytosol, plastid	35.43	50.82
EES06266	Sorghum	cytosol, nucleus, plastid	36.0	50.81
GSMUA_Achr5P24150_001	Banana	mitochondrion	34.29	50.0
VIT_09s0054g00660.t01	Wine grape	cytosol, plastid	46.86	47.4
TraesCS6D01G104500.1	Wheat	cytosol	33.71	47.2
Os02t0143400-00	Rice	cytosol, mitochondrion	34.86	46.92
VIT_09s0054g00740.t01	Wine grape	cytosol, plastid	46.86	46.33
Zm00001d053884_P001	Maize	cytosol	34.86	46.21
TraesCS6A01G115700.1	Wheat	cytosol	33.71	46.09
TraesCS6B01G143500.1	Wheat	cytosol	33.71	46.09
TraesCS7A01G418100.1	Wheat	mitochondrion	34.86	45.52
TraesCS7D01G411100.1	Wheat	cytosol, mitochondrion, nucleus	34.86	44.85
TraesCS7B01G318200.1	Wheat	cytosol, mitochondrion, nucleus	34.86	44.53
OQU76999	Sorghum	cytosol	36.0	43.45
Zm00001d026262_P001	Maize	cytosol	41.71	43.2
Zm00001d036463_P001	Maize	cytosol, nucleus, plastid	36.0	42.86
OQU82277	Sorghum	nucleus	41.71	42.69
Os04t0608300-01	Rice	cytosol	42.29	42.05
Zm00001d002374_P001	Maize	nucleus	40.0	41.92
TraesCS2D01G428000.1	Wheat	nucleus	41.71	41.01
TraesCS2B01G451000.1	Wheat	cytosol, mitochondrion, nucleus	41.71	40.78
TraesCS2A01G430400.1	Wheat	nucleus	41.71	40.11
HORVU2Hr1G100360.1	Barley	cytosol, mitochondrion, nucleus	40.57	39.23
PGSC0003DMT400035330	Potato	cytosol	32.57	33.14
HORVU7Hr1G096880.1	Barley	mitochondrion	35.43	32.46
PGSC0003DMT400007582	Potato	nucleus	33.14	32.4
Os06t0701900-00	Rice	mitochondrion	34.29	30.61
PGSC0003DMT400035602	Potato	mitochondrion, plastid	28.0	29.52
PGSC0003DMT400053349	Potato	mitochondrion, plastid	27.43	29.09
PGSC0003DMT400072615	Potato	mitochondrion	18.86	25.78
PGSC0003DMT400007836	Potato	nucleus	28.0	23.0
PGSC0003DMT400023116	Potato	nucleus	18.29	22.07

Protein Annotations

EnsemblPlants:PGSC0003DMT400023703	EnsemblPlantsGene:PGSC0003DMG400009168	EntrezGene:102605261	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF6	PFAM:PF02519	PGSC:PGSC0003DMG400009168	RefSeq:XP_006343120.1
SEG:seg	UniParc:UPI0002958B17	UniProt:M1AIU7	MapMan:35.2	:	:

Description

Indole-3-acetic acid-induced protein ARG7 [Source:PGSC_GENE;Acc:PGSC0003DMG400009168]

Coordinates

chr3:+:62089942..62090469

Molecular Weight (calculated)

19690.8 Da

IEP (calculated)

9.353

GRAVY (calculated)

-0.512

Length

175 amino acids

Sequence
(BLAST)

001: MDIPSNNKQL LRSGNKIRQI VRLQQLLKKW KKIAAASPSS THLQRNTSSG NGGINKFLKK TLSFSDKEYD INNNNVPKGC LAVLCVGKEE EKRFVIPMDY
101: LAHQSFQVLL REAEEEFGFQ QQGILKIPCQ LSLFDKILKT IQSNKQPNDD SNVVGGCCSP DNHQHNIIPP QLCSI

Best Arabidopsis Sequence Match ( AT2G24400.1 )
(BLAST)

001: MEAKKSNKIR EIVKLQQLLK KWRKQAIASK AANNNNEDNN SSGGGSKSIK FLKRTLSFTD VTAVPKGYLA VSVGLEKKRY TIPTEYLSHQ AFYVLLREAE
101: EEFGFQQAGV LRIPCEVSVF ESILKIMEEK NEGYLVTPIT AKQECKFNAA ADDKTSYQHP SDCPKTPSHQ PHNSPMCR

Arabidopsis Description

At2g24400 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ28]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.