Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84572 | Canola | cytosol, mitochondrion | 95.28 | 95.28 |
| CDX75063 | Canola | mitochondrion | 85.04 | 83.08 |
| CDX84150 | Canola | mitochondrion | 85.04 | 83.08 |
| AT2G36210.1 | Thale cress | mitochondrion | 87.4 | 82.22 |
| CDY43741 | Canola | cytosol, mitochondrion | 73.23 | 75.61 |
| CDY43742 | Canola | mitochondrion | 72.44 | 74.8 |
| VIT_08s0007g03120.t01 | Wine grape | mitochondrion | 55.91 | 56.8 |
| KRH67943 | Soybean | cytosol | 51.18 | 52.42 |
| KRH72276 | Soybean | mitochondrion | 51.97 | 51.56 |
| KRH32771 | Soybean | mitochondrion | 51.18 | 50.78 |
| KRG96201 | Soybean | cytosol, mitochondrion | 50.39 | 50.39 |
| PGSC0003DMT400072615 | Potato | mitochondrion | 50.39 | 50.0 |
| Solyc10g083320.1.1 | Tomato | mitochondrion | 50.39 | 50.0 |
| PGSC0003DMT400023116 | Potato | nucleus | 53.54 | 46.9 |
| Solyc09g009980.1.1 | Tomato | mitochondrion | 54.33 | 46.62 |
| CDY25398 | Canola | cytosol | 28.35 | 30.77 |
| CDY29803 | Canola | cytosol | 27.56 | 29.91 |
| CDY12336 | Canola | cytosol | 30.71 | 24.53 |
| CDX70944 | Canola | cytosol | 30.71 | 22.94 |
| CDY45067 | Canola | cytosol | 29.13 | 22.42 |
| CDX88840 | Canola | cytosol | 29.92 | 22.35 |
| CDY16564 | Canola | cytosol | 29.13 | 22.29 |
| CDX92434 | Canola | cytosol | 29.13 | 22.29 |
| CDY20311 | Canola | cytosol, mitochondrion, nucleus | 22.05 | 16.0 |
| CDY46148 | Canola | cytosol, mitochondrion, nucleus | 22.05 | 15.91 |
| CDY13423 | Canola | nucleus | 22.05 | 15.73 |
| CDY36449 | Canola | cytosol, nucleus, plastid | 22.05 | 15.38 |
| CDX68733 | Canola | nucleus | 22.05 | 14.89 |
| CDY28255 | Canola | nucleus | 21.26 | 14.36 |
| CDX72302 | Canola | nucleus | 22.05 | 13.4 |
Protein Annotations
| EnsemblPlants:CDX79664 | EnsemblPlantsGene:GSBRNA2T00132459001 | GO:A0A078CUI3 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF28 | PFAM:PF02519 | ProteinID:CDX79664 | ProteinID:CDX79664.1 |
| UniParc:UPI0004EDDD4E | MapMan:35.2 | : | : | : | : |
Description
BnaC03g20000D
Coordinates
chrLK031818:-:1449529..1449912
Molecular Weight (calculated)
14220.1 Da
IEP (calculated)
6.931
GRAVY (calculated)
-0.164
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGKRIASFK NLAKKMKSIN TREGGSESTH NESLLISEAD IAATKTPTGT FAVYVGEDRA RRVVPTSYLN HPLFRMLLDK SHDEFHCLDQ KVMLVVPCSL
101: SVFQDVVNAI ESCNGNFKFG DFVEEFL
101: SVFQDVVNAI ESCNGNFKFG DFVEEFL
001: MLGKRIASFK NLAKKMKSIN TTTRSGGEGG SESTYNESLL MNEADEAAMM ASKTPTGTFA VYVGEERVKR VVPTSYLNHP LFRMLLDKSH DEFLCFEQKV
101: MLVVPCSLSV FQDVVNAVES CNGNFDFGEF VEEFL
101: MLVVPCSLSV FQDVVNAVES CNGNFDFGEF VEEFL
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q8L8B9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.