Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d004384_P001 | Maize | mitochondrion | 67.23 | 90.84 |
| Os02t0143300-00 | Rice | mitochondrion | 46.89 | 68.03 |
| TraesCS6A01G115600.1 | Wheat | cytosol | 42.94 | 60.8 |
| TraesCS6D01G104400.1 | Wheat | cytosol | 42.37 | 60.0 |
| TraesCS6B01G143400.1 | Wheat | cytosol | 42.37 | 60.0 |
| HORVU6Hr1G020840.1 | Barley | cytosol | 41.81 | 58.73 |
| EER90331 | Sorghum | mitochondrion | 35.03 | 46.27 |
| EES04503 | Sorghum | plastid | 49.72 | 45.83 |
| GSMUA_Achr5P24140_001 | Banana | extracellular, plastid | 30.51 | 35.29 |
| CDY29803 | Canola | cytosol | 23.16 | 35.04 |
| VIT_09s0054g00730.t01 | Wine grape | mitochondrion | 26.55 | 34.31 |
| Bra035803.1-P | Field mustard | cytosol | 22.6 | 34.19 |
| CDY25398 | Canola | cytosol | 22.6 | 34.19 |
| VIT_09s0054g00670.t01 | Wine grape | mitochondrion | 26.55 | 33.33 |
| AT3G20220.1 | Thale cress | cytosol | 22.03 | 33.05 |
| OQU76999 | Sorghum | cytosol | 23.73 | 28.97 |
| KRH44682 | Soybean | plastid | 21.47 | 27.54 |
| EES06266 | Sorghum | cytosol, nucleus, plastid | 19.21 | 27.42 |
| OQU82277 | Sorghum | nucleus | 21.47 | 22.22 |
| EER96781 | Sorghum | cytosol | 27.12 | 19.67 |
Protein Annotations
| EnsemblPlants:OQU81155 | EnsemblPlantsGene:SORBI_3006G019200 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:SAUR_fam | PANTHER:PTHR31374 | PANTHER:PTHR31374:SF111 | PFAM:PF02519 |
| ProteinID:OQU81155 | ProteinID:OQU81155.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B426800 | UniProt:A0A1Z5RCI8 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:3307823..3308869
Molecular Weight (calculated)
19453.2 Da
IEP (calculated)
9.237
GRAVY (calculated)
-0.228
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTCSHHPIS SPSPLFFSCY LVFGRPTPRT LLLLVLACIA MMAMSYFRAP RRLYGRKQHQ QQKRESAALL VDEDGGDDQG EAAAAAGAVP KGYFAVYVGA
101: ESRRFVVPTS YLSEPAFREL MERAAEEFGF NQAGGLRIPC REEDFQATVA ALEQSRRRGA GWARGSAAGT TRWARAS
101: ESRRFVVPTS YLSEPAFREL MERAAEEFGF NQAGGLRIPC REEDFQATVA ALEQSRRRGA GWARGSAAGT TRWARAS
001: MDENNAAKLT GIRQIVRLKE ILQKWQTVTI GPKSEVPPLA AGKQAVAMIS PAINKRLLDV KNGDSDEETC QSPEPPHDVP KGNLAVYVGP ELRRFIIPTS
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSGKPPK DQLLPRDHTM NSNPGGQPRL NPGTGLKSKP
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSGKPPK DQLLPRDHTM NSNPGGQPRL NPGTGLKSKP
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q2V359]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.