Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G143400.1 | Wheat | cytosol | 99.2 | 99.2 |
| TraesCS6A01G115600.1 | Wheat | cytosol | 98.4 | 98.4 |
| HORVU6Hr1G020840.1 | Barley | cytosol | 98.4 | 97.62 |
| Os02t0143300-00 | Rice | mitochondrion | 65.6 | 67.21 |
| Zm00001d004384_P001 | Maize | mitochondrion | 58.4 | 55.73 |
| TraesCS7D01G411000.1 | Wheat | mitochondrion | 48.8 | 49.59 |
| OQU81155 | Sorghum | plastid | 60.0 | 42.37 |
| EES04503 | Sorghum | plastid | 56.8 | 36.98 |
| GSMUA_Achr5P24140_001 | Banana | extracellular, plastid | 41.6 | 33.99 |
| VIT_09s0054g00730.t01 | Wine grape | mitochondrion | 35.2 | 32.12 |
| CDY29803 | Canola | cytosol | 28.8 | 30.77 |
| Bra035803.1-P | Field mustard | cytosol | 28.0 | 29.91 |
| CDY25398 | Canola | cytosol | 28.0 | 29.91 |
| VIT_09s0054g00670.t01 | Wine grape | mitochondrion | 33.6 | 29.79 |
| TraesCS6D01G104500.1 | Wheat | cytosol | 29.6 | 29.6 |
| AT3G20220.1 | Thale cress | cytosol | 27.2 | 28.81 |
| TraesCS7D01G411100.1 | Wheat | cytosol, mitochondrion, nucleus | 31.2 | 28.68 |
| TraesCS7D01G160000.1 | Wheat | cytosol | 33.6 | 26.58 |
| KRH44682 | Soybean | plastid | 27.2 | 24.64 |
| TraesCS5D01G222500.1 | Wheat | cytosol | 32.0 | 21.62 |
| TraesCS2D01G428000.1 | Wheat | nucleus | 30.4 | 21.35 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G104400.1 | EnsemblPlantsGene:TraesCS6D01G104400 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | InterPro:SAUR_fam |
| PANTHER:PTHR31374 | PANTHER:PTHR31374:SF111 | PFAM:PF02519 | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6D:+:68081632..68082009
Molecular Weight (calculated)
13627.3 Da
IEP (calculated)
9.993
GRAVY (calculated)
-0.161
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMGYFWAPR KSAAVERDQS LRAGLLVDGG SGEAAAVPKG YFAVYVGAEA RRFVVPMGYL HQPAFRALME LAAEEFGFGQ AGGLRIPCRE EDFVAIVAAL
101: EATAESRQRR RSAAGRRSRS NATPW
101: EATAESRQRR RSAAGRRSRS NATPW
001: MDENNAAKLT GIRQIVRLKE ILQKWQTVTI GPKSEVPPLA AGKQAVAMIS PAINKRLLDV KNGDSDEETC QSPEPPHDVP KGNLAVYVGP ELRRFIIPTS
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
101: YLSHSLFKVL LEKAEEEFGF DQSGALTIPC EVETFKYLLK CMENNLKDLH PDDNSDGEAV AAKEE
Arabidopsis Description
SAUR-like auxin-responsive protein family [Source:UniProtKB/TrEMBL;Acc:Q2V359]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.