Factsheet for Zm00001d005803_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020606_P001	Maize	cytosol	78.45	73.58
Os09t0437400-00	Rice	cytosol	64.64	61.58
HORVU5Hr1G062580.1	Barley	cytosol	57.46	60.12
TraesCS5D01G222500.1	Wheat	cytosol	60.77	59.46
TraesCS5A01G211300.1	Wheat	cytosol	60.77	59.14
TraesCS5B01G212500.1	Wheat	cytosol	60.22	58.92
EER96781	Sorghum	cytosol	77.9	57.79
GSMUA_Achr7P19840_001	Banana	cytosol	48.62	57.14
GSMUA_Achr5P22090_001	Banana	cytosol	46.96	55.19
AT3G43120.1	Thale cress	cytosol	41.44	46.88
VIT_11s0016g00520.t01	Wine grape	cytosol	40.88	45.4
CDY12336	Canola	cytosol	39.78	45.28
Bra034954.1-P	Field mustard	cytosol	39.78	45.28
CDX88840	Canola	cytosol	41.99	44.71
PGSC0003DMT400035330	Potato	cytosol	41.99	44.19
CDX70944	Canola	cytosol	41.44	44.12
Bra002330.1-P	Field mustard	cytosol	40.33	43.98
CDY45067	Canola	cytosol	39.78	43.64
Bra020127.1-P	Field mustard	cytosol	39.78	43.64
CDX92434	Canola	cytosol	39.78	43.37
CDY16564	Canola	cytosol	39.78	43.37
KRH19368	Soybean	cytosol	37.02	42.68
KRH37551	Soybean	cytosol	38.12	41.32
Solyc12g009280.1.1	Tomato	nucleus	40.33	40.78
PGSC0003DMT400007582	Potato	nucleus	39.78	40.22
KRH04133	Soybean	cytosol	23.76	39.81
Zm00001d053884_P001	Maize	cytosol	28.18	38.64
KRH12612	Soybean	mitochondrion	22.1	38.1
AT5G20810.2	Thale cress	cytosol	39.78	37.89
Solyc07g042470.2.1	Tomato	cytosol	41.99	37.44
Solyc05g025920.2.1	Tomato	nucleus	39.23	35.86
Zm00001d036463_P001	Maize	cytosol, nucleus, plastid	28.73	35.37
PGSC0003DMT400007836	Potato	nucleus	41.44	35.21
Bra006576.1-P	Field mustard	cytosol	41.44	34.88
Zm00001d004384_P001	Maize	mitochondrion	23.2	32.06
Zm00001d014682_P001	Maize	mitochondrion	22.1	30.77
Zm00001d026262_P001	Maize	cytosol	28.18	30.18
Zm00001d002374_P001	Maize	nucleus	27.62	29.94
Zm00001d045039_P001	Maize	nucleus	34.25	26.27
KRH02563	Soybean	cytosol	38.67	25.0

Protein Annotations

EnsemblPlants:Zm00001d005803_P001	EnsemblPlants:Zm00001d005803_T001	EnsemblPlantsGene:Zm00001d005803	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
InterPro:SAUR_fam	PANTHER:PTHR31374	PANTHER:PTHR31374:SF22	PFAM:PF02519	ProteinID:ONM22139.1	SEG:seg
UniParc:UPI0002208528	UniProt:A0A1D6EQW9	MapMan:35.2	:	:	:

Description

SAUR-like auxin-responsive protein family

Coordinates

chr2:-:189211330..189212136

Molecular Weight (calculated)

20150.7 Da

IEP (calculated)

4.988

GRAVY (calculated)

-0.700

Length

181 amino acids

Sequence
(BLAST)

001: MGDDDGAKAA TGAKQMVRLR ELLHKWQHLM ALADQKQQRE EEEDDHAAGG GVPEEAVAPA IPPLVVRRLR RTETAESVSD DESCGHSPEP PPPPPDVPRG
101: YCPVYVGAEQ RRFVIPTGYL AHPVFRLLLE KAEEEFGFQH QGALAIPCET EAFKYILQCV QRHDRRGDDE AANQEPAMHR A

Best Arabidopsis Sequence Match ( AT3G43120.1 )
(BLAST)

001: MDENNAAKLT GIKQIVRLKE ILQKWQTVTI GSKSDDGELG ARKHTAIISP VINKRLLDLK TCDSDEETTC QSPEPPPDVP KGYLAVYVGP ELRRFIIPTN
101: FLSHSLFKVL LEKAEEEYGF DHSGALTIPC EVETFKYLLK CIENHPKDDT SAEDPVETEE

Arabidopsis Description

Auxin-responsive protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M249]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.