Factsheet for GSMUA_Achr10P12390_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0150g00510.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	68.76	62.6
GSMUA_Achr10P...	Banana	cytosol	44.65	60.0
EES12087	Sorghum	cytosol	61.84	56.62
Os04t0403701-01	Rice	cytosol, nucleus, peroxisome	61.01	55.96
TraesCS2B01G307000.1	Wheat	nucleus	60.8	55.88
HORVU2Hr1G071850.2	Barley	nucleus	60.59	55.68
TraesCS2A01G290500.1	Wheat	nucleus	60.38	55.49
Zm00001d000124_P003	Maize	cytosol, peroxisome, plastid	60.38	55.28
Zm00001d025323_P004	Maize	cytosol, peroxisome, plastid	60.38	55.28
TraesCS2D01G288400.1	Wheat	nucleus	59.96	52.48
GSMUA_Achr6P23480_001	Banana	cytosol	20.13	28.74
GSMUA_Achr2P16350_001	Banana	mitochondrion	33.54	28.73
GSMUA_Achr4P04870_001	Banana	cytosol	20.55	28.66
GSMUA_Achr9P03940_001	Banana	cytosol, nucleus, peroxisome	33.96	28.22
GSMUA_Achr5P29080_001	Banana	mitochondrion	33.96	28.08
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	36.69	27.82
GSMUA_Achr3P00610_001	Banana	cytosol	20.13	27.59
GSMUA_Achr5P13850_001	Banana	nucleus	35.01	27.47
GSMUA_Achr6P11170_001	Banana	cytosol	21.59	27.39
GSMUA_Achr3P02220_001	Banana	mitochondrion	21.59	27.39
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus, peroxisome	33.33	27.27
GSMUA_Achr8P13470_001	Banana	mitochondrion	21.59	26.96
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	33.75	26.44
GSMUA_Achr2P21550_001	Banana	mitochondrion	21.38	26.42
GSMUA_Achr6P15470_001	Banana	mitochondrion	20.96	26.39
GSMUA_Achr4P14220_001	Banana	mitochondrion	20.34	26.01
GSMUA_Achr11P...	Banana	mitochondrion	20.55	25.93
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	20.55	25.59
GSMUA_Achr10P...	Banana	cytosol	20.13	25.53
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	21.17	25.44
GSMUA_Achr5P11520_001	Banana	mitochondrion	20.96	25.25
GSMUA_Achr2P02070_001	Banana	mitochondrion	19.29	24.73
GSMUA_Achr3P26820_001	Banana	mitochondrion	20.13	24.37
GSMUA_Achr9P24110_001	Banana	cytosol	20.34	24.25
GSMUA_Achr8P18740_001	Banana	cytosol, nucleus, peroxisome	37.32	23.92
GSMUA_Achr8P13120_001	Banana	cytosol	19.5	23.72

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G12390_001	EnsemblPlants:GSMUA_Achr10P12390_001	EnsemblPlants:GSMUA_Achr10T12390_001	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0RHL5	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF309	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00029673E4
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 39 [Source:GMGC_GENE;Acc:GSMUA_Achr10G12390_001]

Coordinates

chr10:-:21423282..21425693

Molecular Weight (calculated)

52516.8 Da

IEP (calculated)

4.568

GRAVY (calculated)

-0.223

Length

477 amino acids

Sequence
(BLAST)

001: MEEFDKSPKS SSDLNVSFGY QCSAYQSSLC SSEVNYKFEL SSGVNIQESN INKMRNSSFS CLSGAALSAN HTLANTNICN GVIGEEILPE LDSPQSFKRV
101: LSSASLSRLD LHSPSSPSDS GTLEGVRSSS FLNAMDVQMA GGAAGEDRVQ AVCSEENGWL FCGVYDGFNG RDAADFLAGT LYENIGYNLF LELSLAIESL
201: NNKLKPNLFL NSTEECSTES FRLGVLNCLT SALVQAENDF MYRVEQEMDD RPDLVSVGSC VLTVLLHGMV LYAMNLGDSR AVLATSSLIK DDPPRAIQLT
301: ETHTLDNEEE YRRILADHPD DPSPVTGGRV KGKLKLTRAF GVGYLKKRNL NDALMGILRV RDLRSPPYVY THPFTTSHEV SENDLFVVLG SDGLFDFYTN
401: DEVVQLVHQF IEDHPFDDPA KHLIEQLLLR AAENAGLTTE ELMNIPLGRR RKYHDDVTVI VIILGNKQRT STASTAI

Best Arabidopsis Sequence Match ( AT3G16560.1 )
(BLAST)

001: MQEGTDPYGE IEISFGYQCN NKKIGIPEDK IADGREVLGG FRLQKTSSFS CLSGAALSGN PTLANTNICN GVIGSEILPS LDSPKSFRKV PSSPALSKLD
101: ILSPSLHGSM VSLSCSSSTS PSPPEPESCY LTSMSSPSSV NEGFLLSAME VQVAGGAAGE DRVQAVCSEE NGWLFCAIYD GFNGRDAADF LACTLYESIV
201: FHLQLLDRQM KQTKSDDDGE KLELLSNISN VDYSSTDLFR QGVLDCLNRA LFQAETDFLR MVEQEMEERP DLVSVGSCVL VTLLVGKDLY VLNLGDSRAV
301: LATYNGNKKL QAVQLTEDHT VDNEVEEARL LSEHLDDPKI VIGGKIKGKL KVTRALGVGY LKKEKLNDAL MGILRVRNLL SPPYVSVEPS MRVHKITESD
401: HFVIVASDGL FDFFSNEEAI GLVHSFVSSN PSGDPAKFLL ERLVAKAAAR AGFTLEELTN VPAGRRRRYH DDVTIMVITL GTDQRTSKAS TFV

Arabidopsis Description

Protein phosphatase 2C family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VFN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.