Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P00610_001 | Banana | cytosol | 76.07 | 86.78 |
| GSMUA_Achr4P04870_001 | Banana | cytosol | 71.28 | 82.75 |
| GSMUA_Achr3P26820_001 | Banana | mitochondrion | 80.86 | 81.47 |
| EER90402 | Sorghum | mitochondrion | 77.58 | 79.18 |
| Os06t0717800-01 | Rice | mitochondrion | 76.83 | 77.81 |
| Zm00001d014797_P001 | Maize | mitochondrion | 77.08 | 77.67 |
| Solyc03g033340.2.1 | Tomato | mitochondrion | 77.08 | 77.08 |
| PGSC0003DMT400058098 | Potato | mitochondrion | 77.08 | 77.08 |
| VIT_03s0038g02650.t01 | Wine grape | mitochondrion | 76.57 | 76.57 |
| PGSC0003DMT400046486 | Potato | mitochondrion | 74.81 | 76.55 |
| PGSC0003DMT400009248 | Potato | mitochondrion | 75.06 | 76.41 |
| KRH07984 | Soybean | mitochondrion | 75.82 | 76.4 |
| Solyc01g111730.2.1 | Tomato | cytosol, mitochondrion, plastid | 74.56 | 76.29 |
| PGSC0003DMT400068706 | Potato | mitochondrion | 73.55 | 76.24 |
| KRH69725 | Soybean | mitochondrion | 75.57 | 76.14 |
| Solyc10g055650.1.1 | Tomato | cytosol | 64.99 | 76.11 |
| GSMUA_Achr7P03910_001 | Banana | cytosol, nucleus, peroxisome | 73.3 | 75.98 |
| Solyc02g083420.2.1 | Tomato | mitochondrion | 74.56 | 75.9 |
| KRH36089 | Soybean | cytosol | 75.82 | 75.82 |
| TraesCS7B01G455500.1 | Wheat | mitochondrion | 74.56 | 75.51 |
| HORVU7Hr1G117970.1 | Barley | mitochondrion | 74.56 | 75.51 |
| TraesCS7A01G537000.1 | Wheat | mitochondrion | 74.31 | 75.26 |
| KRG90665 | Soybean | mitochondrion | 75.06 | 75.06 |
| GSMUA_Achr5P11520_001 | Banana | mitochondrion | 74.56 | 74.75 |
| TraesCS7D01G524700.1 | Wheat | mitochondrion | 73.8 | 74.74 |
| CDY16313 | Canola | extracellular | 70.53 | 74.27 |
| CDX73725 | Canola | vacuole | 69.77 | 73.47 |
| AT3G51370.1 | Thale cress | cytosol, extracellular | 70.03 | 73.35 |
| CDY33283 | Canola | plastid | 70.53 | 73.3 |
| Bra038895.1-P | Field mustard | plastid | 70.53 | 73.3 |
| GSMUA_Achr8P13120_001 | Banana | cytosol | 71.79 | 72.7 |
| AT5G66080.1 | Thale cress | plastid | 69.77 | 71.95 |
| GSMUA_Achr9P24110_001 | Banana | cytosol | 72.29 | 71.75 |
| Bra033566.1-P | Field mustard | cytosol, nucleus, plastid | 69.77 | 69.77 |
| VIT_00s0434g00020.t01 | Wine grape | cytosol | 70.78 | 68.87 |
| AT4G38520.1 | Thale cress | mitochondrion | 69.27 | 68.75 |
| CDY12086 | Canola | cytosol, mitochondrion, nucleus | 64.99 | 67.89 |
| CDX90277 | Canola | cytosol, mitochondrion, nucleus | 64.74 | 67.63 |
| Bra010741.1-P | Field mustard | plastid | 64.74 | 67.63 |
| GSMUA_Achr10P... | Banana | cytosol | 63.98 | 67.55 |
| GSMUA_Achr6P15470_001 | Banana | mitochondrion | 64.23 | 67.28 |
| CDY54807 | Canola | nucleus, peroxisome, plastid | 66.0 | 67.18 |
| GSMUA_Achr6P23480_001 | Banana | cytosol | 55.92 | 66.47 |
| CDY70696 | Canola | extracellular, peroxisome | 53.4 | 65.43 |
| CDY29015 | Canola | cytosol | 52.64 | 58.06 |
| Zm00001d036395_P008 | Maize | mitochondrion | 77.08 | 57.52 |
| GSMUA_Achr11P... | Banana | mitochondrion | 53.9 | 56.61 |
| Bra036813.1-P | Field mustard | vacuole | 69.02 | 54.91 |
| CDX78002 | Canola | vacuole | 69.02 | 54.91 |
| GSMUA_Achr2P02070_001 | Banana | mitochondrion | 51.39 | 54.84 |
| GSMUA_Achr8P13470_001 | Banana | mitochondrion | 51.39 | 53.4 |
| GSMUA_Achr6P11170_001 | Banana | cytosol | 50.13 | 52.93 |
| GSMUA_Achr2P21550_001 | Banana | mitochondrion | 48.11 | 49.48 |
| GSMUA_Achr3P02220_001 | Banana | mitochondrion | 46.6 | 49.2 |
| GSMUA_Achr4P14220_001 | Banana | mitochondrion | 46.1 | 49.06 |
| GSMUA_Achr10P... | Banana | cytosol | 23.68 | 26.48 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plastid | 25.44 | 21.17 |
| GSMUA_Achr5P29080_001 | Banana | mitochondrion | 28.97 | 19.93 |
| GSMUA_Achr2P16350_001 | Banana | mitochondrion | 27.2 | 19.39 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 29.47 | 18.6 |
| GSMUA_Achr9P03940_001 | Banana | cytosol, nucleus, peroxisome | 26.7 | 18.47 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus, plastid | 28.21 | 18.39 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus, peroxisome | 26.7 | 18.18 |
| GSMUA_Achr5P13850_001 | Banana | nucleus | 26.7 | 17.43 |
| GSMUA_Achr8P18740_001 | Banana | cytosol, nucleus, peroxisome | 28.97 | 15.46 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.4 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | GO:GO:0046872 |
| EnsemblPlantsGene:GSMUA_Achr1G26350_001 | EnsemblPlants:GSMUA_Achr1P26350_001 | EnsemblPlants:GSMUA_Achr1T26350_001 | InterPro:IPR001932 | InterPro:IPR036457 | UniProt:M0S392 |
| PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF409 | SMART:SM00332 | SUPFAM:SSF81606 | SignalP:SignalP-noTM |
| UniParc:UPI0002951D15 | SEG:seg | : | : | : | : |
Description
Probable protein phosphatase 2C 60 [Source:GMGC_GENE;Acc:GSMUA_Achr1G26350_001]
Coordinates
chr1:-:21729959..21734317
Molecular Weight (calculated)
43485.5 Da
IEP (calculated)
8.376
GRAVY (calculated)
-0.129
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAALMNILK ACWQPAVGGH VHTGSDVVGR QDGLLWYKDS GQHINGEFSM AVIQANSLLE DQSQIESGPL SLLDSEPYGT FVGVYDGHGG PETSCYINNH
101: LFQHLKRFAA EQQSMSAEVI RKAYQATEEG FLSLVTKQWP IKPQIAAVGS CCLVGVISGG LIYTANLGDS RVVLGKLVKA TGKVLAVQLS AEHNAGIESV
201: RQELQSMHPE DKQVVVLKHN VWRVKGLIQI TRSIGDVYLK KAEFNREPLY AKFRLREPFK KPILSAEPSI SVQPMQPQDL FLIFASDGLW EHLSNQEAVD
301: IVHNNPHSGI ARRLIKAALR EAAKKREMRY SDLNKIDRGV RRHFHDDITV IVVFLNADLV SGASSLKGPT LSMRGGGINL PAHSLAPCTT PTGPCAT
101: LFQHLKRFAA EQQSMSAEVI RKAYQATEEG FLSLVTKQWP IKPQIAAVGS CCLVGVISGG LIYTANLGDS RVVLGKLVKA TGKVLAVQLS AEHNAGIESV
201: RQELQSMHPE DKQVVVLKHN VWRVKGLIQI TRSIGDVYLK KAEFNREPLY AKFRLREPFK KPILSAEPSI SVQPMQPQDL FLIFASDGLW EHLSNQEAVD
301: IVHNNPHSGI ARRLIKAALR EAAKKREMRY SDLNKIDRGV RRHFHDDITV IVVFLNADLV SGASSLKGPT LSMRGGGINL PAHSLAPCTT PTGPCAT
001: MLSGLMNFLN ACLWPRSDQQ ARSASDSGGR QEGLLWFRDS GQHVFGDFSM AVVQANSLLE DQSQLESGSL SSHDSGPFGT FVGVYDGHGG PETSRFINDH
101: MFHHLKRFTA EQQCMSSEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVSVICDG KLYVANAGDS RAVLGQVMRV TGEAHATQLS AEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRSPFS KPLLSAEPAI TVHTLEPHDQ FIICASDGLW EHMSNQEAVD
301: IVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFFDTNLV SRGSMLRGPA VSVRGAGVNL PHNTLAPCTT PTQAAAAGAS
101: MFHHLKRFTA EQQCMSSEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVSVICDG KLYVANAGDS RAVLGQVMRV TGEAHATQLS AEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRSPFS KPLLSAEPAI TVHTLEPHDQ FIICASDGLW EHMSNQEAVD
301: IVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFFDTNLV SRGSMLRGPA VSVRGAGVNL PHNTLAPCTT PTQAAAAGAS
Arabidopsis Description
APD6 [Source:UniProtKB/TrEMBL;Acc:A0A178UT21]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.