Factsheet for GSMUA_Achr6P23480_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P15470_001	Banana	mitochondrion	83.23	73.35
GSMUA_Achr10P...	Banana	cytosol	81.74	72.61
GSMUA_Achr4P04870_001	Banana	cytosol	70.06	68.42
GSMUA_Achr3P00610_001	Banana	cytosol	69.16	66.38
VIT_08s0040g02970.t01	Wine grape	cytosol	70.36	62.01
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	69.76	61.48
Os01t0976700-01	Rice	mitochondrion	69.16	61.44
TraesCS3B01G604000.1	Wheat	mitochondrion	69.46	60.1
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	68.86	60.05
PGSC0003DMT400028715	Potato	cytosol	67.07	59.57
AT3G12620.2	Thale cress	mitochondrion	68.56	59.48
PGSC0003DMT400060005	Potato	cytosol	68.26	59.38
CDY42159	Canola	cytosol	67.37	59.37
TraesCS3A01G538500.1	Wheat	mitochondrion	68.56	59.33
TraesCS3D01G544100.1	Wheat	mitochondrion	68.56	59.33
Solyc10g084410.1.1	Tomato	mitochondrion	66.77	59.31
CDY08420	Canola	cytosol, mitochondrion, plastid	66.77	58.84
Solyc09g007080.2.1	Tomato	cytosol	66.17	58.47
CDX76124	Canola	mitochondrion	65.27	58.29
HORVU3Hr1G117670.6	Barley	mitochondrion	68.86	58.23
CDY52665	Canola	cytosol	65.87	58.05
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	67.37	57.99
PGSC0003DMT400005115	Potato	cytosol	65.57	57.94
CDY51441	Canola	mitochondrion	67.07	57.88
Bra007131.1-P	Field mustard	mitochondrion	67.07	57.88
HORVU3Hr1G114160.1	Barley	mitochondrion	53.89	57.88
AT3G55050.2	Thale cress	mitochondrion	66.47	57.81
KRH19775	Soybean	cytosol	64.07	57.68
CDY50535	Canola	cytosol, mitochondrion, plastid	66.77	57.62
CDX73413	Canola	mitochondrion	66.77	57.62
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	66.77	57.62
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	65.87	57.59
KRH32367	Soybean	cytosol	63.77	57.41
GSMUA_Achr3P26820_001	Banana	mitochondrion	67.66	57.36
Solyc05g055980.2.1	Tomato	cytosol	53.89	57.32
CDY02904	Canola	mitochondrion	64.07	57.22
KRH67612	Soybean	cytosol	61.08	57.14
GSMUA_Achr9P24110_001	Banana	cytosol	68.26	57.0
GSMUA_Achr5P11520_001	Banana	mitochondrion	67.37	56.82
KRG95894	Soybean	cytosol	62.87	56.76
CDY10428	Canola	mitochondrion	61.38	56.47
TraesCS7A01G386400.1	Wheat	cytosol	23.65	56.43
GSMUA_Achr8P13120_001	Banana	cytosol	66.17	56.38
CDY11224	Canola	cytosol	60.18	56.3
Bra009569.1-P	Field mustard	mitochondrion	60.78	55.92
CDX70348	Canola	cytosol, mitochondrion	60.78	55.92
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	66.47	55.92
Bra028865.1-P	Field mustard	mitochondrion	60.18	55.83
Bra005755.1-P	Field mustard	cytosol	59.58	55.74
AT5G02760.1	Thale cress	cytosol, mitochondrion	61.68	55.68
KRG93033	Soybean	mitochondrion	64.67	55.67
CDY04862	Canola	cytosol, mitochondrion, plastid	59.88	55.56
KRH36281	Soybean	mitochondrion	64.37	55.27
CDY55405	Canola	cytosol, nucleus, plastid	60.78	55.01
CDX80837	Canola	cytosol, mitochondrion	59.58	54.67
GSMUA_Achr6P11170_001	Banana	cytosol	56.89	50.53
GSMUA_Achr11P...	Banana	mitochondrion	56.29	49.74
GSMUA_Achr8P13470_001	Banana	mitochondrion	55.99	48.95
GSMUA_Achr2P02070_001	Banana	mitochondrion	52.69	47.31
GSMUA_Achr4P14220_001	Banana	mitochondrion	51.8	46.38
GSMUA_Achr2P21550_001	Banana	mitochondrion	53.29	46.11
GSMUA_Achr3P02220_001	Banana	mitochondrion	50.6	44.95
HORVU2Hr1G009490.1	Barley	mitochondrion	19.16	40.51
GSMUA_Achr10P...	Banana	cytosol	27.25	25.63
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	28.74	20.13
GSMUA_Achr2P16350_001	Banana	mitochondrion	33.53	20.11
GSMUA_Achr5P29080_001	Banana	mitochondrion	32.93	19.06
GSMUA_Achr9P03940_001	Banana	cytosol, nucleus, peroxisome	32.34	18.82
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	32.63	17.9
GSMUA_Achr5P13850_001	Banana	nucleus	32.04	17.6
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus, peroxisome	30.24	17.32
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	32.34	17.17
GSMUA_Achr8P18740_001	Banana	cytosol, nucleus, peroxisome	30.84	13.84

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr6G23480_001	EnsemblPlants:GSMUA_Achr6P23480_001	EnsemblPlants:GSMUA_Achr6T23480_001	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0T9J6
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF342	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002954B3D

Description

Probable protein phosphatase 2C 38 [Source:GMGC_GENE;Acc:GSMUA_Achr6G23480_001]

Coordinates

chr6:+:23681027..23684022

Molecular Weight (calculated)

37045.5 Da

IEP (calculated)

6.740

GRAVY (calculated)

-0.182

Length

334 amino acids

Sequence
(BLAST)

001: MAVVQANNLL EDRSQIESGP LGWNKAAAAD GPHGTFVGVY DGHGGPEASR FITEHLFPNL KKFASEQPDM SADVIRKAFS ATEEDFISLV RKQWLIKPQV
101: ASVGSCCLVG VISSGMLFVA NVGDSRVVLG RFEEGIGEVT AVQMCTEHNA SFESVRNELR SLHPDDPNIV VLKNKVWRVK GLIQVSRSIG DAYLKNAEFN
201: REPLLSRFRL PEPIEKPILS AEPSIVTHKL CPEDQFLIFA SDGLWEHLTN EEAVDMIHNT PRSGIARRLV KAAIQEAARK REMRYSDLEK MDRGTRRHFH
301: DDITVIVLFL DSALINKNLC HSPILSLKGA GVPT

Best Arabidopsis Sequence Match ( AT3G12620.1 )
(BLAST)

001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST

Arabidopsis Description

PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.