Factsheet for PGSC0003DMT400028715

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g084410.1.1	Tomato	mitochondrion	96.81	96.81
PGSC0003DMT400005115	Potato	cytosol	80.05	79.63
VIT_08s0040g02970.t01	Wine grape	cytosol	73.67	73.09
GSMUA_Achr6P23480_001	Banana	cytosol	59.57	67.07
PGSC0003DMT400060005	Potato	cytosol	68.35	66.93
GSMUA_Achr10P...	Banana	cytosol	66.22	66.22
PGSC0003DMT400046486	Potato	mitochondrion	67.82	65.72
KRH67612	Soybean	cytosol	62.23	65.55
PGSC0003DMT400068706	Potato	mitochondrion	65.96	64.75
GSMUA_Achr6P15470_001	Banana	mitochondrion	65.16	64.64
KRG95894	Soybean	cytosol	63.56	64.59
TraesCS3A01G538500.1	Wheat	mitochondrion	66.22	64.51
TraesCS3B01G604000.1	Wheat	mitochondrion	65.69	63.99
HORVU3Hr1G114160.1	Barley	mitochondrion	52.93	63.99
TraesCS3D01G544100.1	Wheat	mitochondrion	65.43	63.73
Os01t0976700-01	Rice	mitochondrion	63.3	63.3
PGSC0003DMT400009248	Potato	mitochondrion	65.43	63.08
HORVU3Hr1G117670.6	Barley	mitochondrion	65.96	62.78
KRH32367	Soybean	cytosol	61.7	62.53
KRH19775	Soybean	cytosol	61.7	62.53
PGSC0003DMT400058098	Potato	mitochondrion	64.1	60.71
TraesCS7A01G386400.1	Wheat	cytosol	21.54	57.86
PGSC0003DMT400067223	Potato	mitochondrion	51.86	52.14
PGSC0003DMT400066175	Potato	cytosol	50.27	50.4
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	49.47	50.13
PGSC0003DMT400064207	Potato	cytosol	48.67	49.19
HORVU2Hr1G009490.1	Barley	mitochondrion	20.21	48.1
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	45.48	44.3
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	42.29	40.77
PGSC0003DMT400029765	Potato	mitochondrion	42.82	39.36
PGSC0003DMT400029776	Potato	cytosol	16.76	34.24
PGSC0003DMT400029770	Potato	mitochondrion	38.3	33.8
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	27.13	19.58
PGSC0003DMT400011807	Potato	nucleus	25.53	19.35
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	30.59	19.17
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	30.05	17.91
PGSC0003DMT400078173	Potato	nucleus	31.65	16.71
PGSC0003DMT400052881	Potato	nucleus	30.32	14.6
PGSC0003DMT400045127	Potato	nucleus	30.32	14.29
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	9.57	10.59

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102603660	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1ARK2	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400011050
PGSC:PGSC0003DMG400011050	EnsemblPlants:PGSC0003DMT400028715	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF367	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000294FE0A	RefSeq:XP_006339293.1	SEG:seg	:	:	:

Description

Protein phosphatase 2C 38 [Source:PGSC_GENE;Acc:PGSC0003DMG400011050]

Coordinates

chr10:+:54707084..54709808

Molecular Weight (calculated)

41750.1 Da

IEP (calculated)

9.914

GRAVY (calculated)

-0.312

Length

376 amino acids

Sequence
(BLAST)

001: MVMLCWRPSV KRDGSRRGGD PNGRFKGLMW YKDLGVHANG EFSMAVIQAN NLMEDQSQLE SGPLSSVKLG PQGTFVGVYD GHGGPETSRF INNAMFSNLK
101: KFASEHQEIS ADAIRKSFLK TEEEFLSLVK RQWQEKPQIA TVGSCCLAGV ICSGLLYTAN VGDSRAVLGR VDKAAKSVAA IQLSTEHNAS IESVRDELRS
201: LHPQDSQIVV LKHNVWRVKG IIQVSRSIGD AYLKKSEFNQ APLLARFRLP EPFSEPILSA EPSISVHKLS SKDQFVIFAS DGLWDHLSNQ EAVDIVHSHP
301: RNGIARELIK AALHIAAKKR EMRYSDLKKI DRGVRRHFHD DITVVVVFID PYSMNRSSSR SSILSIRGGT PSSPKM

Best Arabidopsis Sequence Match ( AT3G12620.1 )
(BLAST)

001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST

Arabidopsis Description

PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.