Factsheet for PGSC0003DMT400029776

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029765	Potato	mitochondrion	80.98	36.43
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	70.65	33.68
PGSC0003DMT400029770	Potato	mitochondrion	65.22	28.17
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	52.17	24.62
KRH71850	Soybean	mitochondrion	41.3	20.77
VIT_08s0007g06510.t01	Wine grape	mitochondrion	42.93	20.26
KRH38102	Soybean	mitochondrion	41.3	19.74
Bra009224.1-P	Field mustard	cytosol, mitochondrion	36.41	19.42
KXG26992	Sorghum	cytosol, mitochondrion	40.22	18.83
Os02t0685600-01	Rice	mitochondrion, plasma membrane	38.59	18.35
GSMUA_Achr8P13470_001	Banana	mitochondrion	38.04	18.32
KXG30997	Sorghum	mitochondrion	38.59	18.3
Bra028720.1-P	Field mustard	mitochondrion	37.5	17.97
AT5G06750.3	Thale cress	cytosol, mitochondrion	38.04	17.81
KRG95384	Soybean	mitochondrion	37.5	17.65
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	36.96	17.44
HORVU2Hr1G104630.4	Barley	cytosol, mitochondrion, nucleus, peroxisome	36.96	17.44
TraesCS2D01G456600.2	Wheat	mitochondrion	36.96	17.44
PGSC0003DMT400068706	Potato	mitochondrion	35.87	17.23
TraesCS2A01G456300.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	36.41	17.18
PGSC0003DMT400028715	Potato	cytosol	34.24	16.76
PGSC0003DMT400046486	Potato	mitochondrion	33.15	15.72
PGSC0003DMT400009248	Potato	mitochondrion	33.15	15.64
PGSC0003DMT400005115	Potato	cytosol	31.52	15.34
PGSC0003DMT400058098	Potato	mitochondrion	32.61	15.11
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	29.89	14.82
PGSC0003DMT400067223	Potato	mitochondrion	29.35	14.44
PGSC0003DMT400064207	Potato	cytosol	28.8	14.25
PGSC0003DMT400066175	Potato	cytosol	28.8	14.13
PGSC0003DMT400060005	Potato	cytosol	28.26	13.54
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	17.93	6.33
PGSC0003DMT400011807	Potato	nucleus	16.3	6.05
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	17.93	5.5
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	16.85	4.91
PGSC0003DMT400078173	Potato	nucleus	16.85	4.35
PGSC0003DMT400045127	Potato	nucleus	17.93	4.14
PGSC0003DMT400052881	Potato	nucleus	15.76	3.71
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	0.54	0.29
Zm00001d044834_P001	Maize	golgi	0.54	0.27

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1ATD8	PFAM:PF00481
EnsemblPlantsGene:PGSC0003DMG400011443	PGSC:PGSC0003DMG400011443	EnsemblPlants:PGSC0003DMT400029776	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF239	SUPFAM:SSF81606	UniParc:UPI000296712D	SEG:seg

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400011443]

Coordinates

chr10:+:58906247..58907229

Molecular Weight (calculated)

20876.4 Da

IEP (calculated)

4.191

GRAVY (calculated)

-0.426

Length

184 amino acids

Sequence
(BLAST)

001: MEPFRRLVVR ADPSVCSRNL QAVDRFVIFA SYGLWDLLSN EEAVQIVHTY PRQGIARRLV LSALNVAARA RKLKYDDLMN YDKGVSRAFH DDITVVVIFI
101: DHEMLNDELT VPGMSVRGFV DTHRPSDFNI EQEVATESEL TETELTETEP TETKPTETEP TETEPTETEP TETGLTETEL TETV

Best Arabidopsis Sequence Match ( AT5G06750.2 )
(BLAST)

001: MPFGQDLVMK SVFMKPELER LILCLGVSRE RSCISEEALR AAFSATEEGF LTLVRRTCGL KPLIAAVGSC CLVGVIWKGT LLIANVGDSR AVLGSMGSNN
101: NRSNKIVAEQ LTSDHNAALE EVRQELRSLH PDDSHIVVLK HGVWRIKGII QVSRSIGDAY LKRPEFSLDP SFPRFHLAEE LQRPVLSAEP CVYTRVLQTS
201: DKFVIFASDG LWEQMTNQQA VEIVNKHPRP GIARRLVRRA ITIAAKKREM NYDDLKKVER GVRRFFHDDI TVVVIFIDNE LLMVEKATVP ELSIKGFSHT
301: VGPSKFSIFL S

Arabidopsis Description

Probable protein phosphatase 2C 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84JD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.