CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
peroxisome 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002542_P001	Maize	cytosol, mitochondrion	91.35	91.58
HORVU2Hr1G104630.4	Barley	cytosol, mitochondrion, nucleus, peroxisome	80.92	81.54
TraesCS2A01G456300.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	80.66	81.28
TraesCS2D01G456600.2	Wheat	mitochondrion	80.41	81.03
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	80.41	81.03
KXG30997	Sorghum	mitochondrion	73.03	73.97
GSMUA_Achr8P13470_001	Banana	mitochondrion	70.74	72.77
VIT_08s0007g06510.t01	Wine grape	mitochondrion	68.96	69.49
KRH38102	Soybean	mitochondrion	64.38	65.71
KRH71850	Soybean	mitochondrion	60.31	64.75
CDY14069	Canola	cytosol, mitochondrion	62.85	63.17
CDY05001	Canola	cytosol, mitochondrion	62.09	62.4
Bra028720.1-P	Field mustard	mitochondrion	60.81	62.24
AT5G06750.3	Thale cress	cytosol, mitochondrion	61.83	61.83
CDX70071	Canola	cytosol, mitochondrion	60.05	61.62
CDX98953	Canola	cytosol, mitochondrion	59.54	61.1
Bra009224.1-P	Field mustard	cytosol, mitochondrion	52.42	59.71
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	53.44	54.4
EER90402	Sorghum	mitochondrion	51.65	52.19
EER94559	Sorghum	cytosol	50.89	50.89
EER95550	Sorghum	mitochondrion, peroxisome, plastid	51.15	50.38
KXG37497	Sorghum	mitochondrion	48.09	50.13
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	48.6	50.0
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	49.62	50.0
PGSC0003DMT400029765	Potato	mitochondrion	50.64	48.66
Solyc10g078810.1.1	Tomato	cytosol	51.91	46.58
EER95306	Sorghum	mitochondrion	44.78	44.9
Solyc10g078820.1.1	Tomato	mitochondrion	52.16	44.57
PGSC0003DMT400029770	Potato	mitochondrion	46.82	43.19
PGSC0003DMT400029776	Potato	cytosol	18.83	40.22
EES12087	Sorghum	cytosol	24.43	18.43
EES07427	Sorghum	plastid	27.99	18.36
EER90623	Sorghum	plastid	27.99	17.35
OQU92823	Sorghum	plastid	23.41	17.13
EES17579	Sorghum	mitochondrion, peroxisome, plastid	24.43	16.38
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	25.19	16.05
Solyc10g078800.1.1	Tomato	mitochondrion	49.36	14.79
OQU92535	Sorghum	nucleus	25.45	11.15

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EntrezGene:8057697	UniProt:C5YEK5
ProteinID:EES12725.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	ProteinID:KXG26991.1
EnsemblPlants:KXG26992	ProteinID:KXG26992	ProteinID:KXG26992.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF239
SMART:SM00332	EnsemblPlantsGene:SORBI_3006G192200	SUPFAM:SSF81606	UniParc:UPI0001A87377	RefSeq:XP_002448397.1	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:54612740..54615938

Molecular Weight (calculated)

43495.5 Da

IEP (calculated)

6.706

GRAVY (calculated)

-0.280

Length

393 amino acids

Sequence
(BLAST)

001: MWPWLERIAS ACWDRVRRYG LTRKGEDDGG DGGEGDAGAV DELLWSRDLA RHAAGEFSFA VVQANDVLED QSQVETAAAA TFVGVYDGHG GAEASRFISN
101: HLSAHIVRLA QEHGTMSEDV VRKAFSATEE GFLSLVRRTH LIKPAMATIG SCCLVGIIWR GTLYLANLGD SRAVVGCLNG SNRIVAEQLT RDHNASMEEI
201: RQELRTLHPD DSQIVVLKNG VWRIKGIIQV SRSIGDAYLK KREFAADPST ARFHLSEPLR RPVLTSEPSV CSRVLSSQDR FLIFASDGLW EHLSNQQAVE
301: MVHNNPREGI ARRLVQAALK EAARKREMRY GDIKKLDKGV RRYIHDDITV VVVFVDHELR SEDSASTSVP ELSVRGFIDA GGRSSFSGMN DIT

Best Arabidopsis Sequence Match ( AT5G06750.1 )
(BLAST)

001: MFSWLARMAL FCLRPMRRYG RMNRDDDDDD DHDGDSSSSG DSLLWSRELE RHSFGDFSIA VVQANEVIED HSQVETGNGA VFVGVYDGHG GPEASRYISD
101: HLFSHLMRVS RERSCISEEA LRAAFSATEE GFLTLVRRTC GLKPLIAAVG SCCLVGVIWK GTLLIANVGD SRAVLGSMGS NNNRSNKIVA EQLTSDHNAA
201: LEEVRQELRS LHPDDSHIVV LKHGVWRIKG IIQVSRSIGD AYLKRPEFSL DPSFPRFHLA EELQRPVLSA EPCVYTRVLQ TSDKFVIFAS DGLWEQMTNQ
301: QAVEIVNKHP RPGIARRLVR RAITIAAKKR EMNYDDLKKV ERGVRRFFHD DITVVVIFID NELLMVEKAT VPELSIKGFS HTVGPSKFSI FLS

Arabidopsis Description

Probable protein phosphatase 2C 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84JD5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.