CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047385_P004	Maize	cytosol, mitochondrion, plastid	96.95	95.73
Os10t0544900-01	Rice	plastid	87.02	87.02
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	83.72	83.93
TraesCS1A01G205300.2	Wheat	cytosol, peroxisome, plastid	83.72	83.93
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	82.95	83.16
HORVU1Hr1G052770.6	Barley	nucleus, peroxisome, plastid	83.72	82.46
EER95550	Sorghum	mitochondrion, peroxisome, plastid	79.13	77.94
Solyc10g055650.1.1	Tomato	cytosol	63.61	73.75
VIT_03s0038g02650.t01	Wine grape	mitochondrion	73.28	72.54
PGSC0003DMT400068706	Potato	mitochondrion	70.23	72.06
KRH36089	Soybean	cytosol	72.01	71.28
KRG90665	Soybean	mitochondrion	71.5	70.78
EER90402	Sorghum	mitochondrion	69.97	70.69
PGSC0003DMT400009248	Potato	mitochondrion	69.97	70.51
PGSC0003DMT400046486	Potato	mitochondrion	69.47	70.36
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	69.47	70.36
Solyc03g033340.2.1	Tomato	mitochondrion	70.74	70.03
PGSC0003DMT400058098	Potato	mitochondrion	70.74	70.03
CDY16313	Canola	extracellular	66.92	69.76
Solyc02g083420.2.1	Tomato	mitochondrion	68.96	69.49
CDX90277	Canola	cytosol, mitochondrion, nucleus	67.18	69.47
CDY12086	Canola	cytosol, mitochondrion, nucleus	66.92	69.21
CDY33283	Canola	plastid	67.18	69.11
Bra038895.1-P	Field mustard	plastid	67.18	69.11
KRH07984	Soybean	mitochondrion	69.21	69.04
Bra010741.1-P	Field mustard	plastid	66.67	68.95
KRH69725	Soybean	mitochondrion	68.96	68.78
AT3G51370.1	Thale cress	cytosol, extracellular	65.9	68.34
CDX73725	Canola	vacuole	65.14	67.9
AT5G66080.1	Thale cress	plastid	66.16	67.53
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	67.94	67.25
AT4G38520.1	Thale cress	mitochondrion	68.45	67.25
CDY54807	Canola	nucleus, peroxisome, plastid	65.14	65.64
CDY70696	Canola	extracellular, peroxisome	52.93	64.2
VIT_00s0434g00020.t01	Wine grape	cytosol	64.12	61.76
CDY29015	Canola	cytosol	50.38	55.0
KXG30997	Sorghum	mitochondrion	51.91	52.58
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	50.64	52.09
CDX78002	Canola	vacuole	65.9	51.9
Bra036813.1-P	Field mustard	vacuole	65.9	51.9
KXG26992	Sorghum	cytosol, mitochondrion	50.89	50.89
KXG37497	Sorghum	mitochondrion	46.82	48.81
EER95306	Sorghum	mitochondrion	44.53	44.64
OQU92823	Sorghum	plastid	27.23	19.93
EES12087	Sorghum	cytosol	25.95	19.58
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	30.03	19.12
EES17579	Sorghum	mitochondrion, peroxisome, plastid	28.24	18.94
EER90623	Sorghum	plastid	29.01	17.98
EES07427	Sorghum	plastid	27.23	17.86
OQU92535	Sorghum	nucleus	29.52	12.93

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EntrezGene:8062848	UniProt:C5WTI1
EnsemblPlants:EER94559	ProteinID:EER94559	ProteinID:EER94559.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932
InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF324	SMART:SM00332	EnsemblPlantsGene:SORBI_3001G309500
SUPFAM:SSF81606	UniParc:UPI0001A83029	RefSeq:XP_002467561.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:59481893..59485934

Molecular Weight (calculated)

43418.6 Da

IEP (calculated)

8.339

GRAVY (calculated)

-0.343

Length

393 amino acids

Sequence
(BLAST)

001: MDYLKSCWGP ASPAGRPRRG SDATGRQDGL LWYKDGGQVV DGEFSMAVVQ ANNLLEDHSQ VESGPLSTSE PGLQGTFVGV YDGHGGPETA RYINDHLFNH
101: LRRFASEHKG MSADVIRKAF RATEEGFISV VSDQWSVRPQ LAAVGSCCLV GVVCSGTLYV ANLGDSRAVL GRLVKGTGEV LAMQLSAEHN ASYEEVRREL
201: QASHPDDPHI VVLKHNVWRV KGIIQITRSI GDAYLKKPEF NREPLHSKFR LQETFRRPLL SADPAITVHQ IQPTDKFIIF ASDGLWEHLS NQEAVDMVQS
301: SPRNGIARKL VKSAMQEAAK KREMRYSDLK KIDRGVRRHF HDDITVIVVF FDSNAMTAAA WSRPSVSLRG GGVPIPSNTL APFSVPTELN NSY

Best Arabidopsis Sequence Match ( AT4G38520.2 )
(BLAST)

001: MLSGLMNFLN ACLWPRSDQQ ARSASDSGGR QEGLLWFRDS GQHVFGDFSM AVVQANSLLE DQSQLESGSL SSHDSGPFGT FVGVYDGHGG PETSRFINDH
101: MFHHLKRFTA EQQCMSSEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVSVICDG KLYVANAGDS RAVLGQVMRV TGEAHATQLS AEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRSPFS KPLLSAEPAI TVHTLEPHDQ FIICASDGLW EHMSNQEAVD
301: IVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFFDTNLV SRGSMLRGPA VSVRGAGVNL PHNTLAPCTT PTQAAAAGAS

Arabidopsis Description

APD6 [Source:UniProtKB/TrEMBL;Acc:A0A178UT21]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.