CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013220_P001	Maize	mitochondrion	90.45	92.92
Os03t0761100-01	Rice	mitochondrion	88.59	87.89
TraesCS5D01G408500.1	Wheat	mitochondrion	84.08	85.22
TraesCS5B01G404000.2	Wheat	mitochondrion	84.88	85.11
TraesCS5A01G398900.1	Wheat	mitochondrion	85.15	84.47
HORVU5Hr1G097060.3	Barley	plastid	74.27	71.98
EER95306	Sorghum	mitochondrion	53.58	51.53
KXG30997	Sorghum	mitochondrion	49.87	48.45
KXG26992	Sorghum	cytosol, mitochondrion	50.13	48.09
EER94559	Sorghum	cytosol	48.81	46.82
EER90402	Sorghum	mitochondrion	47.75	46.27
EER95550	Sorghum	mitochondrion, peroxisome, plastid	48.81	46.12
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	44.03	43.46
EES12087	Sorghum	cytosol	25.73	18.62
OQU92823	Sorghum	plastid	24.67	17.32
EES07427	Sorghum	plastid	25.99	16.36
EER90623	Sorghum	plastid	27.06	16.09
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	26.26	16.05
EES17579	Sorghum	mitochondrion, peroxisome, plastid	23.34	15.02
OQU92535	Sorghum	nucleus	27.85	11.71

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	UniProt:A0A1B6QHW1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KXG37497	ProteinID:KXG37497	ProteinID:KXG37497.1
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF292	SMART:SM00332	EnsemblPlantsGene:SORBI_3001G081600	SUPFAM:SSF81606
UniParc:UPI00081ABBDF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:6303890..6306745

Molecular Weight (calculated)

41556.5 Da

IEP (calculated)

9.568

GRAVY (calculated)

-0.320

Length

377 amino acids

Sequence
(BLAST)

001: MLRAVARCCG HWPPGAAAAD GMLWQTELRP HAAGEFSMAA AQANVTMEDQ AQVLASPAAT LVGVYDGHGG ADASRFLRSR LFPHVQRFAR EQGGMSAEAI
101: RSAFGAAEEE FHKQVRQEWT KRPRLAAVGS CCLLGAISGD TLYVANAGDS RAVLGRRVVG GGVAVAERLS TEHNAASEEV RRELTALNPD DAQIVVHARG
201: AWRVKGIIQV SRSIGDFYLK KPEYSLDPLF RQVGAPIPLK RPALSAEPSV QVRKLKPNDL FLIFASDGLW EHLSDDDAVQ IVFKNPRTGI ANRLVKAALK
301: EATRKREVRY RDLRTIDRGV RRHFHDDISV VVVYLDRHRE RRHTRVIDSS SNCTSAPVDI YSSNTHQSAE PLHAYKC

Best Arabidopsis Sequence Match ( AT4G33920.1 )
(BLAST)

001: MLRALARPLE RCLGSRASGD GLLWQSELRP HAGGDYSIAV VQANSRLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYMHKFAR EHGGLSVDVI
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY

Arabidopsis Description

Probable protein phosphatase 2C 63 [Source:UniProtKB/Swiss-Prot;Acc:O81760]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.