CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:

nucleus 1
peroxisome 1
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011062_P001	Maize	cytosol, peroxisome, plastid	75.43	85.16
TraesCS1A01G033700.1	Wheat	mitochondrion	66.38	65.05
HORVU1Hr1G005090.6	Barley	mitochondrion	62.46	58.94
TraesCS1B01G042100.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	54.95	51.6
OQU92823	Sorghum	plastid	37.71	41.15
Os05t0111800-00	Rice	mitochondrion, peroxisome, plastid	42.66	40.26
EER90623	Sorghum	plastid	41.98	38.8
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	40.78	38.74
EES07427	Sorghum	plastid	39.08	38.23
EER90402	Sorghum	mitochondrion	19.11	28.79
EES12087	Sorghum	cytosol	25.43	28.6
EER94559	Sorghum	cytosol	18.94	28.24
EER95550	Sorghum	mitochondrion, peroxisome, plastid	18.77	27.57
KXG30997	Sorghum	mitochondrion	17.24	26.03
OQU92535	Sorghum	nucleus	37.54	24.53
KXG26992	Sorghum	cytosol, mitochondrion	16.38	24.43
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	15.87	24.35
KXG37497	Sorghum	mitochondrion	15.02	23.34
EER95306	Sorghum	mitochondrion	15.53	23.21
HORVU2Hr1G009260.1	Barley	mitochondrion	5.12	15.08

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	EntrezGene:8068679	ProteinID:ACE86392.1
UniProt:B3VTB3	EnsemblPlants:EES17579	ProteinID:EES17579	ProteinID:EES17579.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF351	SMART:SM00332
EnsemblPlantsGene:SORBI_3009G013600	SUPFAM:SSF81606	UniParc:UPI0001787906	RefSeq:XP_002439149.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:+:1193972..1196082

Molecular Weight (calculated)

63015.4 Da

IEP (calculated)

5.757

GRAVY (calculated)

-0.368

Length

586 amino acids

Sequence
(BLAST)

001: MGNRVARLAT PCFAPADGHH HHDADDVHHD TAGPADDGTG VCHILSFDGR DGRIHGVLLP SNQSTLGGSV LLSDRASFSG SSSSFDSSNS FSFRTLQPRQ
101: YSGPLDSYGG GGGSSISASP STSTSATNSG VSSVSRLPAR TDAQILADLY ATRHRRQQQA SSGGSSSLLG GLRRAVASVL RAGPCVSTGG KQEHAVAVGN
201: GAPDVNGGAA RVQWARGKAG EDRVHVVVSE EHGWMFVGIY DGFNGPDATD YLVAHLYAAV CRELDGVLLR GEEEEDEDDN DNGDDEEESS SSVRCNGHPR
301: GARARDHDVL DALARALAST EAGYFAEAEA RAAECPELAM MGSCVLVALV KGADVYVMNV GDSRAVLAQR VEPDLSRALV APRQGGADLA GVKEEIKRQF
401: DACEMGDLVA LQLTMDHSTS VYKEERRIRN EHLDDPACIV NGRVKGSLKV TRAFGAGYLK EPRWNKALLE VFRVKYVGTS PYISCRPFLR HHRVGRRDKF
501: MILASDGLYD YLSNEEVVAQ VEAFTASYPD EDPAKYLSHE ILLRAANQAG MGFHELLEVQ QGDRRRYHDD VSIIIISLEG KIWSSS

Best Arabidopsis Sequence Match ( AT2G28890.1 )
(BLAST)

001: MGNGIGKLSK CLTGGAGRNK KPELSILEPD PLDEGLGHSF CYVRPDPTRV SSSKVHSEEE TTTFRTISGA SVSANTATPL STSLYDPYGH IDRAAAFEST
101: TSFSSIPLQP IPRSSGPIVP GSGPLERGFL SGPIERGFMS GPLDGSSGPI DGKTGSDQFQ RSFSHGLANL RVGSRKGSLV RVLRRAISKT ITRGQNSIVA
201: PIKPVKEPDW VFGSDKTRIH QIENNLTVNS LNFSSEGSLL DDDVSLESQN LQWAQGKAGE DRVHVVVSEE HGWLFVGIYD GFNGPDAPDY LLSHLYPAVH
301: RELKGLLWDD PKTDAKSSDE ADVENRDSSS EKKSKNWEES QRRWRCEWDR DLDRLLKDRS NGLDLDPDPN SSDVLKALSQ ALRKTEEAYL ENADMMLDEN
401: PELALMGSCV LVMLMKGEDV YLMNVGDSRA VLGQKAESDY WIGKIKQDLE RINEETMNDF DGCGDGEGAS LVPTLSAFQL TVDHSTNVEE EVNRIRKEHP
501: DDASAVSNER VKGSLKVTRA FGAGFLKQPK WNNALLEMFQ IDYKGTSPYI NCLPSLYHHR LGSKDQFLIL SSDGLYQYFT NEEAVSEVEL FITLQPEGDP
601: AQHLVQELLF RAAKKAGMDF HELLEIPQGE RRRYHDDVSI VVISLEGRMW KSCV

Arabidopsis Description

PLL4Probable protein phosphatase 2C 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.