CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES06266
KXG38192
OQU76999
OQU82277

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33920.1	EES06266	AT2G24400.1	21798944
AT4G33920.1	OQU76999	AT2G24400.1	21798944
AT4G33920.1	OQU82277	AT2G24400.1	21798944
AT4G33920.1	KXG38192	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048131_P001	Maize	cytosol	92.6	92.84
Os03t0207400-01	Rice	mitochondrion	79.59	79.59
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	73.98	74.55
TraesCS4B01G254700.1	Wheat	plastid	74.74	68.78
TraesCS4A01G050000.1	Wheat	plastid	73.98	67.76
HORVU4Hr1G069380.3	Barley	peroxisome	38.52	63.18
Solyc01g107300.2.1	Tomato	cytosol	35.71	61.14
KRG91074	Soybean	cytosol, mitochondrion	58.16	61.13
KRH35699	Soybean	mitochondrion	58.67	60.85
VIT_03s0091g00470.t01	Wine grape	mitochondrion	58.42	60.1
VIT_07s0129g00520.t01	Wine grape	cytosol	57.91	59.11
KRH77072	Soybean	cytosol	56.38	58.62
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	55.36	58.49
PGSC0003DMT400066175	Potato	cytosol	55.61	58.13
KRH28403	Soybean	cytosol	55.1	57.6
CDY28332	Canola	mitochondrion	56.12	57.29
Bra034592.1-P	Field mustard	mitochondrion	56.12	57.14
VIT_18s0001g09390.t01	Wine grape	mitochondrion	55.1	57.14
CDY51944	Canola	mitochondrion	56.12	57.14
Solyc10g049630.1.1	Tomato	mitochondrion, nucleus	55.1	56.84
AT4G33920.1	Thale cress	mitochondrion	54.85	56.58
Solyc02g092750.2.1	Tomato	cytosol	52.81	56.56
PGSC0003DMT400064207	Potato	cytosol	53.57	56.45
CDX72438	Canola	mitochondrion	53.32	55.88
Bra036972.1-P	Field mustard	mitochondrion	53.32	55.88
CDY49385	Canola	mitochondrion	53.06	55.62
KXG37497	Sorghum	mitochondrion	51.53	53.58
Solyc01g107310.2.1	Tomato	mitochondrion	23.72	50.27
KXG30997	Sorghum	mitochondrion	46.17	46.65
EER95550	Sorghum	mitochondrion, peroxisome, plastid	46.68	45.86
EER90402	Sorghum	mitochondrion	44.64	44.99
KXG26992	Sorghum	cytosol, mitochondrion	44.9	44.78
EER94559	Sorghum	cytosol	44.64	44.53
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	40.31	41.36
EES12087	Sorghum	cytosol	23.47	17.66
OQU92823	Sorghum	plastid	21.94	16.01
EES07427	Sorghum	plastid	24.23	15.86
EES17579	Sorghum	mitochondrion, peroxisome, plastid	23.21	15.53
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	23.72	15.07
EER90623	Sorghum	plastid	24.23	14.98
OQU92535	Sorghum	nucleus	25.0	10.93

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EntrezGene:8054222	UniProt:C5WTQ7
EnsemblPlants:EER95306	ProteinID:EER95306	ProteinID:EER95306.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932
InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF361	SMART:SM00331	SMART:SM00332
EnsemblPlantsGene:SORBI_3001G462800	SUPFAM:SSF81606	unigene:Sbi.12313	UniParc:UPI0001A83467	RefSeq:XP_002468308.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:73719697..73721582

Molecular Weight (calculated)

42236.4 Da

IEP (calculated)

8.112

GRAVY (calculated)

-0.223

Length

392 amino acids

Sequence
(BLAST)

001: MRGLRRWLPF CGGGCCCCGE GGAGRGGGVA DGLVWDVALK AHASGDYSIA VAQANESLED QAQVLAAPAA TLVGVFDGHG GPEAARFVNR RIFSHIQGFA
101: AENGGLSAEV LQKAFGATEE EFIGLVQKSW PSQPRIVSVG SCCLVGAIEG GTLYVANLGD SRAVLGRRGG GGKGNRRVVA ERLSQDHNVA DEDVRREVAE
201: MHPDEPHIVL NSHGVWRIKG IIQVSRSIGD VYLKKPDICR NNPALQQSLC PFPLRRPVMS AVPSITTREL RPGDRFLIFA SDGLWEQLSD EAAVGVVASS
301: PRKGVAMRLV RAAQLEAARK KEVKYDKIRT IEKGQRRHFH DDITVVVLFL DKCRGAARSG PEDIDGTYAP LDVFSYSPAG DHEDPTKPVL RR

Best Arabidopsis Sequence Match ( AT4G33920.1 )
(BLAST)

001: MLRALARPLE RCLGSRASGD GLLWQSELRP HAGGDYSIAV VQANSRLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYMHKFAR EHGGLSVDVI
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY

Arabidopsis Description

Probable protein phosphatase 2C 63 [Source:UniProtKB/Swiss-Prot;Acc:O81760]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.