CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017643_P001	Maize	mitochondrion	94.33	94.57
Os02t0685600-01	Rice	mitochondrion, plasma membrane	84.54	84.75
GSMUA_Achr8P13470_001	Banana	mitochondrion	74.74	75.92
VIT_08s0007g06510.t01	Wine grape	mitochondrion	73.71	73.33
KXG26992	Sorghum	cytosol, mitochondrion	73.97	73.03
KRH71850	Soybean	mitochondrion	67.53	71.58
KRH38102	Soybean	mitochondrion	70.36	70.91
CDY14069	Canola	cytosol, mitochondrion	66.75	66.24
AT5G06750.3	Thale cress	cytosol, mitochondrion	67.01	66.16
CDY05001	Canola	cytosol, mitochondrion	66.49	65.98
Bra028720.1-P	Field mustard	mitochondrion	65.21	65.89
CDX70071	Canola	cytosol, mitochondrion	64.43	65.27
CDX98953	Canola	cytosol, mitochondrion	64.18	65.01
Bra009224.1-P	Field mustard	cytosol, mitochondrion	56.7	63.77
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	52.58	52.85
EER90402	Sorghum	mitochondrion	52.84	52.7
EER94559	Sorghum	cytosol	52.58	51.91
EER95550	Sorghum	mitochondrion, peroxisome, plastid	52.58	51.13
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	50.26	50.0
KXG37497	Sorghum	mitochondrion	48.45	49.87
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	48.97	49.74
PGSC0003DMT400029765	Potato	mitochondrion	50.26	47.68
Solyc10g078810.1.1	Tomato	cytosol	52.32	46.35
EER95306	Sorghum	mitochondrion	46.65	46.17
Solyc10g078820.1.1	Tomato	mitochondrion	52.58	44.35
PGSC0003DMT400029770	Potato	mitochondrion	46.39	42.25
PGSC0003DMT400029776	Potato	cytosol	18.3	38.59
EES12087	Sorghum	cytosol	26.29	19.58
EES07427	Sorghum	plastid	27.84	18.03
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	27.58	17.34
OQU92823	Sorghum	plastid	23.97	17.32
EES17579	Sorghum	mitochondrion, peroxisome, plastid	26.03	17.24
EER90623	Sorghum	plastid	27.84	17.03
Solyc10g078800.1.1	Tomato	mitochondrion	49.23	14.56
OQU92535	Sorghum	nucleus	25.26	10.93

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	UniProt:A0A194YS28	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KXG30997	ProteinID:KXG30997	ProteinID:KXG30997.1
ProteinID:KXG30998.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF239	SMART:SM00332	EnsemblPlantsGene:SORBI_3004G279200
SUPFAM:SSF81606	UniParc:UPI0001C80C82	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:62191268..62194062

Molecular Weight (calculated)

43035.6 Da

IEP (calculated)

9.042

GRAVY (calculated)

-0.169

Length

388 amino acids

Sequence
(BLAST)

001: MWSWLTKIAS ACLGPVRRCA RTRKGEDGAS DNGRGVADDL LWSRDLGRHA AGEFSFAVVQ ANEALEDHSQ VETGSAATFV GVYDGHGGAE AARFISDHIF
101: AHLIRLAQEN GTISEDVVRS AVSATEEDFL TLVRRTHFIK PLIAAVGSCC LVGVIWRGTL YVANLGDSRA VIGCLGRSNK IMAEPLTRDH NASMEEVRQE
201: LISRHPDDSQ IVVLKHGVWR IKGIIQVSRT IGDAYLKRRE FALDPSITRF RLSEPLRRPV LTAEPSMCTR VLNPQDKFII FASDGLWEQL TNQQAVEIVH
301: SNPRRGIAKR LIRAALKQAA RKREMRYNDL RKVEKGVRRF FHDDITVVVV YIEHGLLQGR DTSVPELSVR GFVDSVGPSS FSGITAIS

Best Arabidopsis Sequence Match ( AT5G06750.1 )
(BLAST)

001: MFSWLARMAL FCLRPMRRYG RMNRDDDDDD DHDGDSSSSG DSLLWSRELE RHSFGDFSIA VVQANEVIED HSQVETGNGA VFVGVYDGHG GPEASRYISD
101: HLFSHLMRVS RERSCISEEA LRAAFSATEE GFLTLVRRTC GLKPLIAAVG SCCLVGVIWK GTLLIANVGD SRAVLGSMGS NNNRSNKIVA EQLTSDHNAA
201: LEEVRQELRS LHPDDSHIVV LKHGVWRIKG IIQVSRSIGD AYLKRPEFSL DPSFPRFHLA EELQRPVLSA EPCVYTRVLQ TSDKFVIFAS DGLWEQMTNQ
301: QAVEIVNKHP RPGIARRLVR RAITIAAKKR EMNYDDLKKV ERGVRRFFHD DITVVVIFID NELLMVEKAT VPELSIKGFS HTVGPSKFSI FLS

Arabidopsis Description

Probable protein phosphatase 2C 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84JD5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.