Factsheet for Solyc10g078800.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029765	Potato	mitochondrion	26.6	85.33
Solyc10g078820.1.1	Tomato	mitochondrion	27.59	78.7
Solyc10g078810.1.1	Tomato	cytosol	26.07	78.08
VIT_08s0007g06510.t01	Wine grape	mitochondrion	15.93	53.59
GSMUA_Achr8P13470_001	Banana	mitochondrion	15.17	52.09
KRH38102	Soybean	mitochondrion	15.24	51.95
Bra009224.1-P	Field mustard	cytosol, mitochondrion	13.57	51.59
KRG95384	Soybean	mitochondrion	15.24	51.15
Os02t0685600-01	Rice	mitochondrion, plasma membrane	15.02	50.9
KRH71850	Soybean	mitochondrion	13.95	50.0
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	14.79	49.74
TraesCS2A01G456300.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	14.71	49.49
TraesCS2D01G456600.2	Wheat	mitochondrion	14.71	49.49
KXG26992	Sorghum	cytosol, mitochondrion	14.79	49.36
KXG30997	Sorghum	mitochondrion	14.56	49.23
HORVU2Hr1G104630.4	Barley	cytosol, mitochondrion, nucleus, peroxisome	14.56	48.97
AT5G06750.3	Thale cress	cytosol, mitochondrion	14.63	48.85
Bra028720.1-P	Field mustard	mitochondrion	14.25	48.7
Solyc02g092750.2.1	Tomato	cytosol	12.5	44.81
Solyc10g055650.1.1	Tomato	cytosol	11.51	44.54
Solyc01g107300.2.1	Tomato	cytosol	7.7	44.1
CDY40818	Canola	mitochondrion	4.12	42.86
Solyc10g084410.1.1	Tomato	mitochondrion	11.89	41.49
Solyc10g049630.1.1	Tomato	mitochondrion, nucleus	11.97	41.32
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	12.12	40.98
CDY51276	Canola	mitochondrion	2.52	39.76
Solyc02g083420.2.1	Tomato	mitochondrion	11.74	39.49
Solyc09g007080.2.1	Tomato	cytosol	11.28	39.15
Solyc03g033340.2.1	Tomato	mitochondrion	11.81	39.04
Solyc06g065920.2.1	Tomato	nucleus	10.98	38.5
Solyc05g055980.2.1	Tomato	cytosol	8.77	36.62
Solyc01g107310.2.1	Tomato	mitochondrion	5.03	35.68
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	6.33	26.18
Solyc10g086490.1.1	Tomato	cytosol	7.62	16.78
Solyc12g099600.1.1	Tomato	plasma membrane	7.16	16.35
Solyc09g010780.2.1	Tomato	cytosol	7.7	16.21
Solyc06g076100.2.1	Tomato	nucleus	8.0	14.83
Solyc08g077150.2.1	Tomato	nucleus	7.85	12.94
Solyc08g007000.2.1	Tomato	nucleus	7.47	12.55
Zm00001d044834_P001	Maize	golgi	2.82	10.05

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	UniProt:K4D2C1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF239
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc10g078800.1	EnsemblPlants:Solyc10g078800.1.1	UniParc:UPI000276A3E7	SEG:seg

Description

No Description!

Coordinates

chr10:-:60494959..60502913

Molecular Weight (calculated)

146840.0 Da

IEP (calculated)

5.554

GRAVY (calculated)

-0.374

Length

1312 amino acids

Sequence
(BLAST)

0001: MVSWLDRTVA AFCRPLGRYV GLSSSEDGVL GGEDYPLLWH RDLEKHSCGE FSFAMVQSNE VCEDYGHVEP GREGTFVGVY DGHGGLDASR FACDNLSRHL
0101: ITLAREKETI DEEVLNNAFA ATEDGFLSIV EREFHDDPTI ATTGCCCLVG VIWRRTLYVA SLGDCRAVLG HTGRYNRISA KQLTNDHNVR IKEVRDELRA
0201: LHPDDPDIVR RVGRTWRVKG IIQVTRAIGD ASLKKREFAH GVMEPFTGPV VRADPSVSSR KLQPCDRFVI FASDGLWDFL SNEKAVRIVH AYPRQGIARR
0301: LVLSALNVAA RARKLKCDDL MNFDKGVRRA FHDDITVVVI FIDHEKLNDE LTVPGMSVRG YVDTHRPSDF NIEQEVATET EHTQIEATGT EPTGTETTGS
0401: EPTRTERSET EATEIEPTGT ETTRSEPTRT ELTETEATET EPTGTETTGS EPTRTERSET ELTETEATET EPTGIEATET EPTKTELTVT MFRWLKRIVS
0501: ACCRPLSVYV GLSSGVVVGE DYPVLWHRDL EKHSCGEFSF AIAQANQVCL DYGHVEPGRE GTFVGVYDGH CRVDASRFTC DNLSRHLIIY VGFFRLKQLN
0601: THFFTALARE NGTVDEEVLN NAFAATEDGF LSIVEREFHG DPGIASTGCC CLVGVIWKRR LYVANLGDSR AVLGHIGRFN RILAEQLTND HHVRIKEVRD
0701: ELRALHPDNP NIMSRVRGTW HVNGIKQVTR AIGDAFLKKP EFALGAEPLS GAVIRADPSV SSRNLQPCDR FVIFASAGLW DLLSNEEAVQ IVHTYPRQGI
0801: ARRLVLLAMN VAVRARKKYD DLMNHDKHVR RALHDDITVV VIFIDHEKLN DELTVPGMSV QGFVDTHRPS HFNIEQEVAT ESGVTETEPT ETESSETEHT
0901: EIVPTETESS ETESTGTELT ETMYRWVEKI VLACCEPLSR SLPSSRGEDY PSLWSKDLEK HSCGKFSFAT VSGNPVCEDY GLVEPGRQGT FVGIYDGHGG
1001: PQASRFACDN LSRHLIRLAQ ERRTIDEEVL TNAFAATEQA FLHLVRERFD DDPLIASKGS CCLVGVIWNG TLYVANLGDS RAVLGHDHIE RPNRIVAVQL
1101: TNDHNASNVA IRNELTALHP DDPNIVVYER NAWRVRGIIQ VTRALGDAYL KNKDFALSTS YPKFHLKVPI TRPVVRDDPE ISSRNLQAVD RFVIFASDGL
1201: WELLTNEKAV EIVNTYPKKG IARRLLVSAL DEAARVKKIK YDELKKIGRN ERRNFHDDLT VVVLFIDHNM LNRRLSVPGM TVRGFVNAAP QRSTFNIAQQ
1301: QPGNEEELGD MP

Best Arabidopsis Sequence Match ( AT3G51370.1 )
(BLAST)

001: MLSTLMKLLS ACLWPSSSSG KSSDSTGKQD GLLWYKDFGQ HLVGEFSMAV VQANNLLEDQ SQVESGPLST LDSGPYGTFI GIYDGHGGPE TSRFVNDHLF
101: QHLKRFAAEQ ASMSVDVIKK AYEATEEGFL GVVTKQWPTK PQIAAVGSCC LVGVICGGML YIANVGDSRA VLGRAMKATG EVIALQLSAE HNVSIESVRQ
201: EMHSLHPDDS HIVMLKHNVW RVKGLIQISR SIGDVYLKKA EFNKEPLYTK YRIREPFKRP ILSGEPTITE HEIQPQDKFL IFASDGLWEQ MSNQEAVDIV
301: QNHPRNGIAR RLVKMALQEA AKKREMRYSD LKKIERGVRR HFHDDITVVI IFLDTNQVSS VKGPPLSIRG GGMTFPKKI

Arabidopsis Description

Probable protein phosphatase 2C 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD12]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.