CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51276	Canola	mitochondrion	52.38	79.52
CDY04862	Canola	cytosol, mitochondrion, plastid	89.68	31.39
CDX70348	Canola	cytosol, mitochondrion	89.68	31.13
CDY55405	Canola	cytosol, nucleus, plastid	90.48	30.89
CDY10428	Canola	mitochondrion	88.89	30.85
CDY11224	Canola	cytosol	84.92	29.97
CDX80837	Canola	cytosol, mitochondrion	86.51	29.95
CDY16313	Canola	extracellular	50.79	16.98
CDY33283	Canola	plastid	50.79	16.75
CDX73725	Canola	vacuole	50.0	16.71
CDX90277	Canola	cytosol, mitochondrion, nucleus	50.0	16.58
CDX76124	Canola	mitochondrion	49.21	16.58
CDY02904	Canola	mitochondrion	49.21	16.58
CDY29015	Canola	cytosol	46.83	16.39
CDY42159	Canola	cytosol	48.41	16.09
CDY12086	Canola	cytosol, mitochondrion, nucleus	48.41	16.05
CDY08420	Canola	cytosol, mitochondrion, plastid	47.62	15.83
CDY51441	Canola	mitochondrion	48.41	15.76
CDX73413	Canola	mitochondrion	48.41	15.76
CDY54807	Canola	nucleus, peroxisome, plastid	48.41	15.64
CDY52665	Canola	cytosol	46.83	15.57
CDY50535	Canola	cytosol, mitochondrion, plastid	47.62	15.5
CDY39026	Canola	cytosol, plastid, vacuole	44.44	14.81
CDY34992	Canola	cytosol, plastid, vacuole	44.44	14.81
CDX75902	Canola	plastid	42.86	14.32
CDX72438	Canola	mitochondrion	41.27	13.9
CDY49385	Canola	mitochondrion	40.48	13.64
CDY14069	Canola	cytosol, mitochondrion	42.06	13.55
CDY28332	Canola	mitochondrion	41.27	13.54
CDY51944	Canola	mitochondrion	41.27	13.51
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	41.27	13.33
CDX98953	Canola	cytosol, mitochondrion	39.68	13.05
CDX70071	Canola	cytosol, mitochondrion	39.68	13.05
CDY05001	Canola	cytosol, mitochondrion	40.48	13.04
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	39.68	12.95
PGSC0003DMT400029765	Potato	mitochondrion	41.27	12.71
CDX78002	Canola	vacuole	50.0	12.63
PGSC0003DMT400029770	Potato	mitochondrion	42.06	12.44
Solyc10g078810.1.1	Tomato	cytosol	42.86	12.33
Solyc10g078820.1.1	Tomato	mitochondrion	42.06	11.52
CDY71973	Canola	cytosol, nucleus, peroxisome	25.4	6.03
CDY57256	Canola	cytosol, nucleus, peroxisome	27.78	5.99
CDY71801	Canola	cytosol	25.4	5.87
CDY70696	Canola	extracellular, peroxisome	15.08	5.86
CDY15623	Canola	cytosol, mitochondrion, nucleus, peroxisome	26.19	5.68
CDX95140	Canola	cytosol, mitochondrion, nucleus	27.78	5.65
CDY06718	Canola	mitochondrion, plastid	27.78	5.55
CDY68192	Canola	mitochondrion, nucleus, plastid	24.6	5.49
CDY59038	Canola	plastid	24.6	5.41
CDY31682	Canola	nucleus, plastid	27.78	5.26
CDX84217	Canola	nucleus, plastid	26.98	5.13
CDY43107	Canola	cytosol, nucleus, peroxisome	19.84	5.1
CDX92079	Canola	cytosol, nucleus, peroxisome	19.84	5.04
CDY44706	Canola	nucleus	23.02	4.9
CDY41610	Canola	nucleus	23.02	4.88
CDY07928	Canola	nucleus	25.4	4.83
CDX73980	Canola	nucleus	25.4	4.8
CDY62569	Canola	nucleus	23.02	4.72
CDX80059	Canola	cytosol, nucleus, peroxisome	28.57	4.24
CDY41568	Canola	cytosol, nucleus, peroxisome	28.57	4.23
Solyc10g078800.1.1	Tomato	mitochondrion	42.86	4.12
Zm00001d044834_P001	Maize	golgi	10.32	3.53
CDY71703	Canola	cytosol	0.79	0.5
CDY40354	Canola	cytosol	0.79	0.41

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:A0A078HVK8	UniProt:A0A078HVK8
EnsemblPlants:CDY40818	ProteinID:CDY40818	ProteinID:CDY40818.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00071745001	InterPro:IPR001932	InterPro:IPR036457	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF367	SUPFAM:SSF81606	UniParc:UPI0004EE3438

Description

BnaC01g31380DBnaC01g31380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVK8]

Coordinates

chrLK032480:-:16815..17369

Molecular Weight (calculated)

13995.6 Da

IEP (calculated)

5.160

GRAVY (calculated)

-0.298

Length

126 amino acids

Sequence
(BLAST)

001: MNKSCWRSKI SPTKNYRLTW YKDLGLHAFG EFSMAMIQAN SVMEDQCQIE SGPLTFNNPA VQGTFVGVYS GHGGPEASRF IADNLFPNLK KFASEGGEVS
101: EEVMRNAFAE TDEDFLSAVK KLLVCN

Best Arabidopsis Sequence Match ( AT5G02760.1 )
(BLAST)

001: MVKPCWRIGA GMERSKINPT KVDGLTWYKD LGLHTFGEFS MAMIQANSVM EDQCQIESGP LTFNNPTVQG TFVGVYDGHG GPEASRFIAD NIFPKLKKFA
101: SEGREISEQV ISKAFAETDK DFLKTVTKQW PTNPQMASVG SCCLAGVICN GLVYIANTGD SRAVLGRSER GGVRAVQLSV EHNANLESAR QELWSLHPND
201: PTILVMKHRL WRVKGVIQVT RSIGDAYLKR AEFNREPLLP KFRLPEHFTK PILSADPSVT ITRLSPQDEF IILASDGLWE HLSNQEAVDI VHNSPRQGIA
301: RRLLKAALKE AAKKREMRYS DLTEIHPGVR RHFHDDITVI VVYLNPHPVK TNSWASPLSI RGGYPMHSTS

Arabidopsis Description

Probable protein phosphatase 2C 67 [Source:UniProtKB/Swiss-Prot;Acc:Q501F9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.