Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15623 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 91.95 | 92.43 |
| CDX95140 | Canola | cytosol, mitochondrion, nucleus | 84.42 | 79.52 |
| CDY06718 | Canola | mitochondrion, plastid | 84.25 | 77.97 |
| AT1G07630.1 | Thale cress | cytosol, nucleus, peroxisome | 86.13 | 75.98 |
| CDY71973 | Canola | cytosol, nucleus, peroxisome | 68.49 | 75.33 |
| CDY71801 | Canola | cytosol | 69.86 | 74.86 |
| CDY40354 | Canola | cytosol | 28.25 | 68.46 |
| KRH29800 | Soybean | cytosol, nucleus, plastid | 72.6 | 58.89 |
| KRH24796 | Soybean | nucleus | 72.6 | 58.89 |
| VIT_06s0004g04600.t01 | Wine grape | nucleus | 72.77 | 58.7 |
| Solyc06g076100.2.1 | Tomato | nucleus | 70.38 | 58.05 |
| PGSC0003DMT400078173 | Potato | nucleus | 70.72 | 58.01 |
| CDY71703 | Canola | cytosol | 19.35 | 56.5 |
| CDY62569 | Canola | nucleus | 53.77 | 51.14 |
| CDY44706 | Canola | nucleus | 50.51 | 49.83 |
| CDY41610 | Canola | nucleus | 50.34 | 49.49 |
| CDX73980 | Canola | nucleus | 51.71 | 45.35 |
| CDY07928 | Canola | nucleus | 51.37 | 45.32 |
| CDY68192 | Canola | mitochondrion, nucleus, plastid | 40.41 | 41.77 |
| CDY59038 | Canola | plastid | 39.21 | 39.97 |
| CDY31682 | Canola | nucleus, plastid | 45.21 | 39.7 |
| CDX84217 | Canola | nucleus, plastid | 45.03 | 39.67 |
| CDY41568 | Canola | cytosol, nucleus, peroxisome | 50.0 | 34.31 |
| CDX80059 | Canola | cytosol, nucleus, peroxisome | 49.66 | 34.12 |
| CDY43107 | Canola | cytosol, nucleus, peroxisome | 28.08 | 33.47 |
| CDX92079 | Canola | cytosol, nucleus, peroxisome | 28.08 | 33.06 |
| CDX73725 | Canola | vacuole | 21.23 | 32.89 |
| CDY04862 | Canola | cytosol, mitochondrion, plastid | 20.03 | 32.5 |
| CDY55405 | Canola | cytosol, nucleus, plastid | 20.38 | 32.25 |
| CDY16313 | Canola | extracellular | 20.72 | 32.1 |
| CDY11224 | Canola | cytosol | 19.52 | 31.93 |
| CDX80837 | Canola | cytosol, mitochondrion | 19.86 | 31.87 |
| CDY33283 | Canola | plastid | 20.72 | 31.68 |
| CDX70348 | Canola | cytosol, mitochondrion | 19.52 | 31.41 |
| CDY10428 | Canola | mitochondrion | 19.52 | 31.41 |
| CDY02904 | Canola | mitochondrion | 19.86 | 31.02 |
| CDX76124 | Canola | mitochondrion | 19.86 | 31.02 |
| CDX73413 | Canola | mitochondrion | 20.03 | 30.23 |
| CDY51441 | Canola | mitochondrion | 20.03 | 30.23 |
| CDX90277 | Canola | cytosol, mitochondrion, nucleus | 19.52 | 30.0 |
| CDY12086 | Canola | cytosol, mitochondrion, nucleus | 19.35 | 29.74 |
| CDX98953 | Canola | cytosol, mitochondrion | 19.18 | 29.24 |
| CDX70071 | Canola | cytosol, mitochondrion | 19.01 | 28.98 |
| CDX75902 | Canola | plastid | 18.66 | 28.91 |
| CDY05001 | Canola | cytosol, mitochondrion | 19.35 | 28.9 |
| CDY14069 | Canola | cytosol, mitochondrion | 19.35 | 28.9 |
| CDY34992 | Canola | cytosol, plastid, vacuole | 18.66 | 28.84 |
| CDY39026 | Canola | cytosol, plastid, vacuole | 18.66 | 28.84 |
| CDY52665 | Canola | cytosol | 18.66 | 28.76 |
| CDY50535 | Canola | cytosol, mitochondrion, plastid | 19.01 | 28.68 |
| CDY42159 | Canola | cytosol | 18.49 | 28.5 |
| CDY08420 | Canola | cytosol, mitochondrion, plastid | 18.49 | 28.5 |
| CDY54807 | Canola | nucleus, peroxisome, plastid | 19.01 | 28.46 |
| CDY40818 | Canola | mitochondrion | 5.99 | 27.78 |
| CDX72438 | Canola | mitochondrion | 17.64 | 27.54 |
| CDY70696 | Canola | extracellular, peroxisome | 15.07 | 27.16 |
| CDY28332 | Canola | mitochondrion | 17.81 | 27.08 |
| CDY51944 | Canola | mitochondrion | 17.81 | 27.01 |
| CDY49385 | Canola | mitochondrion | 17.12 | 26.74 |
| CDY51276 | Canola | mitochondrion | 3.6 | 25.3 |
| CDY29015 | Canola | cytosol | 15.41 | 25.0 |
| CDX78002 | Canola | vacuole | 21.23 | 24.85 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.3 | Gene3D:3.60.40.10 | GO:A0A078J496 | UniProt:A0A078J496 |
| EnsemblPlants:CDY57256 | ProteinID:CDY57256 | ProteinID:CDY57256.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00020734001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 |
| InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF228 |
| SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0004EC8D32 | SEG:seg | : | : |
Description
BnaC08g47600DBnaC08g47600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J496]
Coordinates
chrLK033559:-:37830..39963
Molecular Weight (calculated)
65670.1 Da
IEP (calculated)
5.399
GRAVY (calculated)
-0.550
Length
584 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNGVTKLST CFTGRERFRQ KDITFQLPDP LDEGLGHSFC YVRPDQTLTT SSKVHSELEE TTTTVFRTIS GASVSANTAT PLSTSLYDPY GHVDRAAAFE
101: STTSFPSIPL QPIPRSSGDD PIERGFLSGP IERGFMSGSL DDDGDGIDNP SSDHHFQRSF SHGLALRVGS KRRSLVRILR GAISKTVSRR QNSVVAPIRT
201: EKNLKEGTSN DDVSVESQSL QWAQGKAGED RVHVVVSEEH GWLFVGIYDG FNGPDAPDYL LSHLYPTLHR ELKDLLLWNG PHNHCERRWR CEWDQEKQDL
301: DRRLKEQIKH RTGSGSDRLT DHNEVLHALS EALRKTEEAY LDTADKMLEE NPELALMGSC VLVMLMKGED VYVMNVGDSR AVLGQRLERI NEETMIKGCE
401: GDPGLSASQL TVDHSTNVEE EIERIRNEHP DDASAVTNER VKGSLKVTRA FGAGFLKQPK WNNALLEMFQ IDYKGESPYI NCLPSLYHHR LGSKDQFLIL
501: SSDGLYQYFT NEEAVSEVEL FITLQPEGDP AQHLVQELLF RAAKKAGIDF HELLEIPQGE RRRYHDDVSI VVISLEGRMW RSCV
101: STTSFPSIPL QPIPRSSGDD PIERGFLSGP IERGFMSGSL DDDGDGIDNP SSDHHFQRSF SHGLALRVGS KRRSLVRILR GAISKTVSRR QNSVVAPIRT
201: EKNLKEGTSN DDVSVESQSL QWAQGKAGED RVHVVVSEEH GWLFVGIYDG FNGPDAPDYL LSHLYPTLHR ELKDLLLWNG PHNHCERRWR CEWDQEKQDL
301: DRRLKEQIKH RTGSGSDRLT DHNEVLHALS EALRKTEEAY LDTADKMLEE NPELALMGSC VLVMLMKGED VYVMNVGDSR AVLGQRLERI NEETMIKGCE
401: GDPGLSASQL TVDHSTNVEE EIERIRNEHP DDASAVTNER VKGSLKVTRA FGAGFLKQPK WNNALLEMFQ IDYKGESPYI NCLPSLYHHR LGSKDQFLIL
501: SSDGLYQYFT NEEAVSEVEL FITLQPEGDP AQHLVQELLF RAAKKAGIDF HELLEIPQGE RRRYHDDVSI VVISLEGRMW RSCV
001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV
Arabidopsis Description
PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [cytosol,nucleus,peroxisome]
SUBAcon: [cytosol,nucleus,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.