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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY34992 Canola cytosol, plastid, vacuole 92.57 92.33
CDY39026 Canola cytosol, plastid, vacuole 92.57 92.33
AT3G17090.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 89.39 87.76
VIT_05s0077g00830.t01 Wine grape extracellular 75.33 76.76
KRH02370 Soybean cytosol, extracellular, plastid 72.68 73.07
KRH50715 Soybean mitochondrion, peroxisome, plastid 72.41 72.99
KRH36962 Soybean cytosol 70.82 71.39
PGSC0003DMT400067223 Potato mitochondrion 70.56 71.12
KRH11926 Soybean cytosol 69.76 70.7
GSMUA_Achr11P... Banana mitochondrion 70.29 70.11
GSMUA_Achr2P02070_001 Banana mitochondrion 67.37 68.28
HORVU5Hr1G116740.1 Barley cytosol, peroxisome 49.87 65.73
Solyc06g065920.2.1 Tomato nucleus 63.4 63.9
Zm00001d034738_P001 Maize mitochondrion 61.8 61.48
EER90579 Sorghum cytosol, mitochondrion, peroxisome, plastid 61.8 60.99
HORVU4Hr1G020150.2 Barley peroxisome 50.4 59.94
Os03t0832400-01 Rice plasma membrane 61.27 59.84
TraesCS4A01G363400.1 Wheat mitochondrion 59.42 58.79
TraesCS5D01G510100.1 Wheat plastid 59.15 57.92
TraesCS5B01G510000.1 Wheat cytosol, mitochondrion 58.36 57.59
CDX76124 Canola mitochondrion 57.03 57.49
CDY02904 Canola mitochondrion 56.5 56.95
CDX90277 Canola cytosol, mitochondrion, nucleus 57.03 56.58
CDY12086 Canola cytosol, mitochondrion, nucleus 56.23 55.79
CDY08420 Canola cytosol, mitochondrion, plastid 55.44 55.15
CDY52665 Canola cytosol 55.44 55.15
CDY54807 Canola nucleus, peroxisome, plastid 57.03 55.13
CDY42159 Canola cytosol 55.17 54.88
CDY51441 Canola mitochondrion 56.23 54.78
CDX73413 Canola mitochondrion 56.23 54.78
CDY50535 Canola cytosol, mitochondrion, plastid 55.44 54.01
CDX73725 Canola vacuole 53.85 53.85
CDY16313 Canola extracellular 53.85 53.85
CDY70696 Canola extracellular, peroxisome 46.15 53.7
CDY33283 Canola plastid 54.38 53.66
CDX70348 Canola cytosol, mitochondrion 50.66 52.62
CDY04862 Canola cytosol, mitochondrion, plastid 49.6 51.94
CDY11224 Canola cytosol 49.07 51.82
CDY10428 Canola mitochondrion 49.87 51.79
CDY55405 Canola cytosol, nucleus, plastid 49.6 50.68
CDX80837 Canola cytosol, mitochondrion 48.54 50.27
CDY49385 Canola mitochondrion 49.6 50.0
CDX72438 Canola mitochondrion 48.81 49.2
CDY14069 Canola cytosol, mitochondrion 50.93 49.1
CDY28332 Canola mitochondrion 49.87 48.96
CDY05001 Canola cytosol, mitochondrion 50.66 48.85
CDY51944 Canola mitochondrion 49.87 48.83
CDX70071 Canola cytosol, mitochondrion 48.81 48.04
CDX98953 Canola cytosol, mitochondrion 48.54 47.78
CDY29015 Canola cytosol 43.24 45.28
CDY40818 Canola mitochondrion 14.32 42.86
TraesCS5A01G478600.1 Wheat cytosol 38.99 41.76
CDX78002 Canola vacuole 53.85 40.68
CDY51276 Canola mitochondrion 7.16 32.53
CDY40354 Canola cytosol 20.69 32.37
TraesCS3B01G094100.1 Wheat cytosol 53.85 26.4
CDY71703 Canola cytosol 13.0 24.5
CDY43107 Canola cytosol, nucleus, peroxisome 25.46 19.59
CDX92079 Canola cytosol, nucleus, peroxisome 25.46 19.35
CDY57256 Canola cytosol, nucleus, peroxisome 28.91 18.66
CDY71973 Canola cytosol, nucleus, peroxisome 25.99 18.46
CDY15623 Canola cytosol, mitochondrion, nucleus, peroxisome 27.85 18.07
CDY62569 Canola nucleus 29.18 17.92
CDY44706 Canola nucleus 28.12 17.91
CDX95140 Canola cytosol, mitochondrion, nucleus 29.44 17.9
CDY41610 Canola nucleus 28.12 17.85
CDY71801 Canola cytosol 25.73 17.8
CDY06718 Canola mitochondrion, plastid 28.91 17.27
CDX73980 Canola nucleus 30.24 17.12
CDY68192 Canola mitochondrion, nucleus, plastid 25.46 16.99
CDY07928 Canola nucleus 29.71 16.92
CDY59038 Canola plastid 25.46 16.75
CDY31682 Canola nucleus, plastid 27.32 15.49
CDX84217 Canola nucleus, plastid 26.79 15.23
CDX80059 Canola cytosol, nucleus, peroxisome 29.97 13.29
CDY41568 Canola cytosol, nucleus, peroxisome 29.97 13.28
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.4Gene3D:3.60.40.10GO:A0A078CGJ1EnsemblPlants:CDX75902
ProteinID:CDX75902ProteinID:CDX75902.1GO:GO:0003674GO:GO:0003824GO:GO:0004722GO:GO:0005488
GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787
GO:GO:0019538GO:GO:0043169EnsemblPlantsGene:GSBRNA2T00123907001InterPro:IPR001932InterPro:IPR036457PFAM:PF00481
InterPro:PP2CInterPro:PP2C_BSInterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domScanProsite:PS01032PFscan:PS51746
PANTHER:PTHR13832PANTHER:PTHR13832:SF325SMART:SM00332SUPFAM:SSF81606UniParc:UPI0004EE8CEASEG:seg
Description
BnaC03g39850D
Coordinates
chrLK031805:+:1719588..1722299
Molecular Weight (calculated)
41680.6 Da
IEP (calculated)
7.272
GRAVY (calculated)
-0.266
Length
377 amino acids
Sequence
(BLAST)
001: MSGSLMNLLS LCFKPFGRTS DNSNSEAAGS CGSGGEGKDG LLWFRDLGKY RGGEFSMAVI QANQVLEDQS QIESGNFGTF VGVYDGHGGP EAARYVCDHL
101: FNHFREISAE TQGVVTIQRA FNATEEGFAS LVSELWSTMP NLATVGTCCL VGVIYQSTLF VASLGDSRVV LGKKGSSGGL SAIQLSSEHN ANNEDILWEL
201: KDLHPDDPQI VVFKHGVWRV KGIIQVSRSI GDMYMKRQEF NREPIGQKFR IAEPMKRPLM SATPTILSHP LHPNDLFLIF ASDGLWEHLS NEKAVEIVHS
301: HPRAGSAKRL IKAALQEAAR KREMRYSDLK KIDKKVRRHF HDDITVIVVF LNHDLISRGH TNSTQDSALS VRSALEH
Best Arabidopsis Sequence Match ( AT3G17090.1 )
(BLAST)
001: MSGSLMNLFS LCFKPFGHVC DNSEAGSGGG GGVSGGTGGE GKDGLLWFRD LGKYCGGDFS MAVIQANQVL EDQSQVESGN FGTFVGVYDG HGGPEAARYV
101: CDHLFNHFRE ISAETQGVVT RETIERAFHA TEEGFASIVS ELWQEIPNLA TVGTCCLVGV IYQNTLFVAS LGDSRVVLGK KGNCGGLSAI QLSTEHNANN
201: EDIRWELKDL HPDDPQIVVF RHGVWRVKGI IQVSRSIGDM YMKRPEFNKE PISQKFRIAE PMKRPLMSAT PTILSHPLHP NDSFLIFASD GLWEHLTNEK
301: AVEIVHNHPR AGSAKRLIKA ALHEAARKRE MRYSDLRKID KKVRRHFHDD ITVIVVFLNH DLISRGHINS TQDTTVSIRS ALEH
Arabidopsis Description
Probable protein phosphatase 2C 42 [Source:UniProtKB/Swiss-Prot;Acc:Q0V7V2]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.