Factsheet for VIT_05s0077g00830.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
plastid 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus, peroxisome, plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50715	Soybean	mitochondrion, peroxisome, plastid	82.97	82.09
KRH02370	Soybean	cytosol, extracellular, plastid	82.43	81.33
KRH11926	Soybean	cytosol	79.73	79.3
KRH36962	Soybean	cytosol	79.46	78.61
PGSC0003DMT400067223	Potato	mitochondrion	77.3	76.47
Bra021218.1-P	Field mustard	plastid	77.57	75.93
CDY34992	Canola	cytosol, plastid, vacuole	77.3	75.66
CDY39026	Canola	cytosol, plastid, vacuole	77.3	75.66
CDX75902	Canola	plastid	76.76	75.33
GSMUA_Achr11P...	Banana	mitochondrion	75.95	74.34
AT3G17090.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	76.22	73.44
GSMUA_Achr2P02070_001	Banana	mitochondrion	71.89	71.51
Solyc06g065920.2.1	Tomato	nucleus	69.46	68.72
HORVU5Hr1G116740.1	Barley	cytosol, peroxisome	51.62	66.78
Zm00001d034738_P001	Maize	mitochondrion	65.68	64.12
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	65.41	63.35
Os03t0832400-01	Rice	plasma membrane	64.32	61.66
TraesCS4A01G363400.1	Wheat	mitochondrion	62.97	61.15
HORVU4Hr1G020150.2	Barley	peroxisome	52.16	60.88
TraesCS5D01G510100.1	Wheat	plastid	62.7	60.26
TraesCS5B01G510000.1	Wheat	cytosol, mitochondrion	62.16	60.21
VIT_03s0038g02650.t01	Wine grape	mitochondrion	63.24	58.94
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	58.65	57.26
VIT_08s0040g02970.t01	Wine grape	cytosol	55.95	54.62
VIT_00s0434g00020.t01	Wine grape	cytosol	58.38	52.94
VIT_07s0129g00520.t01	Wine grape	cytosol	52.7	50.78
VIT_08s0007g06510.t01	Wine grape	mitochondrion	53.24	50.51
VIT_03s0091g00470.t01	Wine grape	mitochondrion	51.62	50.13
VIT_18s0001g09390.t01	Wine grape	mitochondrion	50.0	48.94
TraesCS5A01G478600.1	Wheat	cytosol	43.24	45.45
TraesCS3B01G094100.1	Wheat	cytosol	55.95	26.92
VIT_05s0020g01460.t01	Wine grape	cytosol, peroxisome, plastid	28.65	21.07
VIT_01s0150g00510.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	28.65	20.23
VIT_08s0007g00310.t01	Wine grape	nucleus	29.46	16.37
VIT_06s0004g04600.t01	Wine grape	nucleus	31.08	15.88
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	30.0	14.1
VIT_07s0005g02390.t01	Wine grape	mitochondrion, nucleus, peroxisome	28.92	13.19

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100241379	wikigene:100241379	MapMan:18.4.24.2.4	Gene3D:3.60.40.10
EMBL:AM467665	ProteinID:CAN72598	ProteinID:CAN72598.1	ProteinID:CBI22869	ProteinID:CBI22869.3	UniProt:D7SYJ9
EMBL:FN595246	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	EntrezGene:LOC100241379
wikigene:LOC100241379	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF325	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI00015CBE8A	ArrayExpress:VIT_05s0077g00830	EnsemblPlantsGene:VIT_05s0077g00830	EnsemblPlants:VIT_05s0077g00830.t01	unigene:Vvi.20409	RefSeq:XP_002273100
RefSeq:XP_002273100.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:648111..652892

Molecular Weight (calculated)

41058.3 Da

IEP (calculated)

7.108

GRAVY (calculated)

-0.130

Length

370 amino acids

Sequence
(BLAST)

001: MLGALMNLLS LCLKPFGRDS GNVELGSEGR EGLLWFRDIG HYASGDFSMA VVQANQVLED QSQIESGPFG TFVGVYDGHG GPEAARYVCD HLFRNFQAIS
101: AESEGVVTTE TIRRAFLQTE EGFTALVSQL WISQPNLASV GSCCLVGVIY EQTLFIANLG DSRVVLGKKV GNTGVVAAIQ LSTEHNANVE AVRQELKDLH
201: PNDPQIVVLK HGVWRVKGII QVSRSIGDVY MKHAQFNREP LNAKFRLPEP MNMPILTANP SIISHTLHPN DSFLIFASDG LWEHLSNEKA VDIVHSHPRA
301: GSAKRLVKAA LQEAARKREM RYSDLRRIDK KVRRHFHDDI TVIVLFLNHD LISRGMVQDP PLSVRSALEH

Best Arabidopsis Sequence Match ( AT3G17090.1 )
(BLAST)

001: MSGSLMNLFS LCFKPFGHVC DNSEAGSGGG GGVSGGTGGE GKDGLLWFRD LGKYCGGDFS MAVIQANQVL EDQSQVESGN FGTFVGVYDG HGGPEAARYV
101: CDHLFNHFRE ISAETQGVVT RETIERAFHA TEEGFASIVS ELWQEIPNLA TVGTCCLVGV IYQNTLFVAS LGDSRVVLGK KGNCGGLSAI QLSTEHNANN
201: EDIRWELKDL HPDDPQIVVF RHGVWRVKGI IQVSRSIGDM YMKRPEFNKE PISQKFRIAE PMKRPLMSAT PTILSHPLHP NDSFLIFASD GLWEHLTNEK
301: AVEIVHNHPR AGSAKRLIKA ALHEAARKRE MRYSDLRKID KKVRRHFHDD ITVIVVFLNH DLISRGHINS TQDTTVSIRS ALEH

Arabidopsis Description

Probable protein phosphatase 2C 42 [Source:UniProtKB/Swiss-Prot;Acc:Q0V7V2]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.