Factsheet for Solyc06g065920.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067223	Potato	mitochondrion	89.84	89.84
VIT_05s0077g00830.t01	Wine grape	extracellular	68.72	69.46
KRH02370	Soybean	cytosol, extracellular, plastid	66.04	65.87
KRH50715	Soybean	mitochondrion, peroxisome, plastid	65.78	65.78
CDY34992	Canola	cytosol, plastid, vacuole	64.71	64.02
CDY39026	Canola	cytosol, plastid, vacuole	64.71	64.02
Bra021218.1-P	Field mustard	plastid	64.44	63.76
KRH11926	Soybean	cytosol	63.37	63.71
KRH36962	Soybean	cytosol	63.64	63.64
CDX75902	Canola	plastid	63.9	63.4
AT3G17090.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	64.44	62.76
GSMUA_Achr11P...	Banana	mitochondrion	61.23	60.58
GSMUA_Achr2P02070_001	Banana	mitochondrion	59.36	59.68
HORVU5Hr1G116740.1	Barley	cytosol, peroxisome	42.25	55.24
Solyc10g055650.1.1	Tomato	cytosol	48.93	53.98
Os03t0832400-01	Rice	plasma membrane	53.74	52.07
Zm00001d034738_P001	Maize	mitochondrion	52.67	51.98
Solyc02g083420.2.1	Tomato	mitochondrion	54.01	51.79
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	53.48	51.55
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	52.14	51.05
TraesCS4A01G363400.1	Wheat	mitochondrion	51.6	50.66
HORVU4Hr1G020150.2	Barley	peroxisome	42.78	50.47
TraesCS5B01G510000.1	Wheat	cytosol, mitochondrion	51.07	50.0
TraesCS5D01G510100.1	Wheat	plastid	51.34	49.87
Solyc03g033340.2.1	Tomato	mitochondrion	51.87	48.87
Solyc10g084410.1.1	Tomato	mitochondrion	48.66	48.4
Solyc09g007080.2.1	Tomato	cytosol	48.66	48.15
Solyc05g055980.2.1	Tomato	cytosol	39.84	47.45
Solyc01g107300.2.1	Tomato	cytosol	28.07	45.85
Solyc10g049630.1.1	Tomato	mitochondrion, nucleus	44.65	43.95
Solyc02g092750.2.1	Tomato	cytosol	41.44	42.35
TraesCS5A01G478600.1	Wheat	cytosol	39.57	42.05
Solyc01g107310.2.1	Tomato	mitochondrion	18.72	37.84
Solyc10g078810.1.1	Tomato	cytosol	39.57	33.79
Solyc10g078820.1.1	Tomato	mitochondrion	40.64	33.04
TraesCS3B01G094100.1	Wheat	cytosol	48.4	23.54
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	19.52	23.03
Solyc10g086490.1.1	Tomato	cytosol	24.6	15.44
Solyc12g099600.1.1	Tomato	plasma membrane	22.46	14.61
Solyc09g010780.2.1	Tomato	cytosol	24.33	14.61
Solyc06g076100.2.1	Tomato	nucleus	26.2	13.84
Solyc08g007000.2.1	Tomato	nucleus	27.54	13.19
Solyc08g077150.2.1	Tomato	nucleus	27.27	12.81
Solyc10g078800.1.1	Tomato	mitochondrion	38.5	10.98

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	UniProt:K4C7M0	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF325
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc06g065920.2	EnsemblPlants:Solyc06g065920.2.1	UniParc:UPI0002765B8E	SEG:seg

Description

No Description!

Coordinates

chr6:-:41312982..41317779

Molecular Weight (calculated)

41714.8 Da

IEP (calculated)

8.332

GRAVY (calculated)

-0.298

Length

374 amino acids

Sequence
(BLAST)

001: MNFLPRCLSY SECSGGAGRS EIRGGESSNG GFGKDGLLWF HDIGNCGSGE YSMAIVQANQ VLEDQSQIES GPFGTFVGVY DGHGGPETAR YVCDHLFRHF
101: QAISAEGNGV VTEETIQRAF LETERGFTSV VSENWHSRPQ LATVGACCLV GAIYQQTLFV ANLGDSRVVL GKKVGNTGEI AAMQLSTEHN ANIESVRWEQ
201: KDLHPNDPQI VVLRHGVWRV KGIIQVSRSI GDVYLKHTRF CREPTNGKFR VPQPLNMPIL LATPTILKHP LHPNDSFLIF ASDGLWEHLS NEKAVEIVKS
301: HPRKGSAKRL VKAALHVAAK KREMRYSDLR NIDKKRRCAR SNTFYSECFR TLIVEGIYYF LLVPEVLSQH QNFP

Best Arabidopsis Sequence Match ( AT3G17090.1 )
(BLAST)

001: MSGSLMNLFS LCFKPFGHVC DNSEAGSGGG GGVSGGTGGE GKDGLLWFRD LGKYCGGDFS MAVIQANQVL EDQSQVESGN FGTFVGVYDG HGGPEAARYV
101: CDHLFNHFRE ISAETQGVVT RETIERAFHA TEEGFASIVS ELWQEIPNLA TVGTCCLVGV IYQNTLFVAS LGDSRVVLGK KGNCGGLSAI QLSTEHNANN
201: EDIRWELKDL HPDDPQIVVF RHGVWRVKGI IQVSRSIGDM YMKRPEFNKE PISQKFRIAE PMKRPLMSAT PTILSHPLHP NDSFLIFASD GLWEHLTNEK
301: AVEIVHNHPR AGSAKRLIKA ALHEAARKRE MRYSDLRKID KKVRRHFHDD ITVIVVFLNH DLISRGHINS TQDTTVSIRS ALEH

Arabidopsis Description

Probable protein phosphatase 2C 42 [Source:UniProtKB/Swiss-Prot;Acc:Q0V7V2]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.