Factsheet for Solyc05g055980.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060005	Potato	cytosol	98.09	80.21
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	74.2	61.48
AT3G12620.2	Thale cress	mitochondrion	74.84	61.04
CDY42159	Canola	cytosol	72.93	60.42
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	73.89	59.79
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	73.57	59.69
CDY50535	Canola	cytosol, mitochondrion, plastid	73.57	59.69
CDY08420	Canola	cytosol, mitochondrion, plastid	71.97	59.63
CDY52665	Canola	cytosol	71.66	59.37
GSMUA_Achr10P...	Banana	cytosol	69.75	58.24
AT3G55050.2	Thale cress	mitochondrion	70.7	57.81
Solyc09g007080.2.1	Tomato	cytosol	68.47	56.88
GSMUA_Achr6P15470_001	Banana	mitochondrion	67.83	56.2
KRG93033	Soybean	mitochondrion	69.43	56.19
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	68.15	56.02
CDX76124	Canola	mitochondrion	66.56	55.88
KRH36281	Soybean	mitochondrion	69.11	55.78
Solyc10g084410.1.1	Tomato	mitochondrion	66.24	55.32
CDY02904	Canola	mitochondrion	65.61	55.08
CDY51441	Canola	mitochondrion	67.83	55.04
Bra007131.1-P	Field mustard	mitochondrion	67.83	55.04
CDX73413	Canola	mitochondrion	67.83	55.04
GSMUA_Achr6P23480_001	Banana	cytosol	57.32	53.89
Os01t0976700-01	Rice	mitochondrion	63.06	52.66
Solyc10g055650.1.1	Tomato	cytosol	56.37	52.21
TraesCS3B01G604000.1	Wheat	mitochondrion	64.01	52.07
TraesCS3A01G538500.1	Wheat	mitochondrion	64.01	52.07
TraesCS3D01G544100.1	Wheat	mitochondrion	63.69	51.81
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	64.01	51.8
HORVU3Hr1G117670.6	Barley	mitochondrion	64.65	51.39
Solyc02g083420.2.1	Tomato	mitochondrion	63.38	51.03
HORVU3Hr1G114160.1	Barley	mitochondrion	49.04	49.52
Solyc03g033340.2.1	Tomato	mitochondrion	62.42	49.37
Solyc01g107310.2.1	Tomato	mitochondrion	25.16	42.7
Solyc06g065920.2.1	Tomato	nucleus	47.45	39.84
Solyc10g049630.1.1	Tomato	mitochondrion, nucleus	47.13	38.95
Solyc02g092750.2.1	Tomato	cytosol	44.59	38.25
HORVU2Hr1G009490.1	Barley	mitochondrion	16.56	32.91
TraesCS7A01G386400.1	Wheat	cytosol	14.65	32.86
Solyc01g107300.2.1	Tomato	cytosol	23.89	32.75
Solyc10g078810.1.1	Tomato	cytosol	40.45	29.0
Solyc10g078820.1.1	Tomato	mitochondrion	41.72	28.48
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	20.06	19.87
Solyc10g086490.1.1	Tomato	cytosol	29.94	15.77
Solyc09g010780.2.1	Tomato	cytosol	30.57	15.41
Solyc06g076100.2.1	Tomato	nucleus	31.53	13.98
Solyc12g099600.1.1	Tomato	plasma membrane	25.48	13.91
Solyc08g007000.2.1	Tomato	nucleus	32.8	13.19
Solyc08g077150.2.1	Tomato	nucleus	31.85	12.56
Solyc10g078800.1.1	Tomato	mitochondrion	36.62	8.77

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	UniProt:K4C2S3	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF358
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc05g055980.2	EnsemblPlants:Solyc05g055980.2.1	UniParc:UPI000276744C	:

Description

No Description!

Coordinates

chr5:-:65384304..65389075

Molecular Weight (calculated)

35160.8 Da

IEP (calculated)

7.473

GRAVY (calculated)

-0.366

Length

314 amino acids

Sequence
(BLAST)

001: MVTSTWKKYV YPCWKPTLDN EGENSSSRGG DPGGSVDGLW WYKDLGHHVN GEFSMAVIQA NNILEDQSQL ESGSMSLFES GPQGTFVGIY DGHAGAEAAR
101: FINGRLFENV KKFTSEDQVK AVQLSSEHNA SLESVREELR SLHPDDPNVV VLKHKVWRVK GIIQVSRSIG DAYLKRAEFN REPLLPKFRF PGTFQKPILL
201: AEPSVFVHKL LPEDQFLIFA SDGLWEHLSN QEAVDIVSSC EHHGIARKLI KAALQEAAKK REMRYADLKR IDRGVRRHFH DDITVIVLFL DSHLISRSSF
301: RAPVVSIKGG GGGP

Best Arabidopsis Sequence Match ( AT3G12620.1 )
(BLAST)

001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST

Arabidopsis Description

PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.